ViewGene

Locus Name:
GeneID:
Location:

GeneID:5275
TrivialName: PA14_13240
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_13240
PAO1 Ortholog Locus:PA3917
Sequence Length:252
Protein Length:83
Start: 1139299
Stop: 1139550
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG07304.1|AE004809_4 (AE004809) molybdopterin converting factor, small subunit [Pseudomonas aeruginosa PAO1]
Identities = 82/83 (98%), Positives = 83/83 (100%)
Sequence:
ATGATCCGCGTGCAGTATTTCGCCCGTTACCGAGAAGCCCTCGGCGTCGACGGCGAGCAGTTGAACTGGGAC
GCCGGGCTGGCGACCCTCGGCGCCTTGCGCCAGCTCCTGGTGGAGCGCGGCGGGGCCTGGGAGCGTACCCTC
GGCGAGCAGAACCTGATGTGCGCGCGCAATCAGGAACTGTGCGGCCTCGACGAGCCGTTGCAGGACGGCGAC
GAAGTCGCCTTCTTCCCCACCGTCACCGGAGGTTGA
Translation:
MIRVQYFARYREALGVDGEQLNWDAGLATLGALRQLLVERGGAWERTLGEQNLMCARNQELCGLDEPLQDGD
EVAFFPTVTGG*
AnnotationID:5280GeneID:5275
AnnotatorUID: danlee
Modification Date/Time: 2006-01-27 15:03:20
Gene Name:moaD
Confidence Code:2
GeneProduct:molybdopterin converting factor, small subunit
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(4) Biosynthesis of cofactors, prosthetic groups and carriers
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG1977,pfam02597,KOG3474
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Molybdopterin biosynthesis
Homology:
46% identity with moaD [Escherichia coli O157:H7 EDL933]
Structural Features:
Genomic Context:
in a cluster of moaCDEB and moeA
Comment:
ReferenceID:10550
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:17128
Author/Investigator(s): Wuebbens MM, Rajagopalan KV.
Title: Mechanistic and mutational studies of Escherichia coli molybdopterin synthase clarify the final step of molybdopterin biosynthesis.
PubMed: 12571226
MedLine:
Source:
J Biol Chem. 2003 Apr 18;278(16):14523-32. Epub 2003 Feb 05.
Reference Type:Online
Data:
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12571226&itool=iconabstr
ReferenceID:17129
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:5275_CDD.html
URL:
ReferenceID:27696
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:5275

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7677 PA3917_tr translation of PA3917 83 98.79 99.99 0 438.0
195497 gb|AAG07304.1|AE004809_4 (AE004809) molybdopterin converting factor, small subunit [Pseudomonas aeruginosa PAO1] 83 98.79 99.99 0 438.0
195498 gb|AAO54773.1| (AE016860) molybdenum cofactor biosynthesis protein D [Pseudomonas syringae pv. tomato str. DC3000] 84 66.66 73.80 4 274.0
195499 gb|AAN66917.1|AE016320_5 (AE016778) molybdenum cofactor biosynthesis protein D [Pseudomonas putida KT2440] 85 60.00 72.94 5 256.0
GC ORFID: 48277How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA3917Glimmer Score:
Start: 3814639Stop: 3814388
Length: 252
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA3917 translation of PA3917Homolog Bit Score 173.0
Other Homologs: psyr_15may02_Scaffold3_revised_gene4385 (ORF: BLASTX 105.0)
GC ORF Sequence
ATGATCCGCGTGCAGTATTTCGCCCGTTACCGAGAAGCCCTCGGCGTCGACGGCGAGCAGTTGAACTGGGAC
GCCGGGCTGGCGACCCTCGGCGCCTTGCGCCAGCTCCTGGTGGAGCGCGGCGGGGCCTGGGAGCGTACCCTC
GGCGAGCAGAACCTGATGTGCGCGCGCAATCAGGAACTGTGCGGCCTCGACGAGCCGTTGCAGGACGGCGAC
GAAGTCGCCTTCTTCCCCACCGTCACCGGAGGTTGA