Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG07951.1| AE004870_2 (AE004870) 30S ribosomal protein S20 [Pseudomonas aeruginosa PAO1]
Identities = 91/91 (100%), Positives = 91/91 (100%)
Sequence:
GTGGCCAACACACCTTCCGCCAAAAAACGCGCCAAACAGGCTGAGAAGCGTCGCAGCCACAACGCCAGCCTG
CGCTCCATGGTGCGCACCTACATCAAGAACGTCGTGAAAGCCATCGACGCCAAGGACCTGGAAAAAGCCCAG
GCCGCCTTCACCGCCGCTGTACCGGTGATCGACCGCATGGCTGACAAAGGCATCATCCACAAGAACAAGGCT
GCTCGTCACAAGAGCCGTCTGAGCGGCCACATCAAGGCCCTCAGCACCGCTGCCGCCTAA
Translation:
MANTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAKDLEKAQAAFTAAVPVIDRMADKGIIHKNKA
ARHKSRLSGHIKALSTAAA*
AnnotationID:5279 GeneID:5274
Modification Date/Time:
2005-05-05 07:07:03
GeneProduct: ribosomal protein S20
Cell Localization Confidence Code: 5
Functional Category: (26) Translation, post-translational modification, degradation
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: >gb|AAO54344.1| (AE016858) ribosomal protein S20 [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 92
Score = 163 bits (412), Expect = 2e-40
Identities = 84/91 (92%), Positives = 86/91 (94%)
>gb|AAN78527.1| AE016755_27 (AE016755) 30S ribosomal protein S20 [Escherichia coli CFT073]
Length = 87
Score = 101 bits (251), Expect = 1e-21
Identities = 52/87 (59%), Positives = 62/87 (71%)
Structural Features: COG0268 , RpsT, Ribosomal protein S20
[Translation, ribosomal structure and biogenesis]
CD-Length = 88 residues, 100.0% aligned
Score = 69.2 bits (169), Expect = 2e-13
Identities = 49/88 (55%), Positives = 60/88 (68%)
pfam01649 , Ribosomal_S20p, Ribosomal protein S20.
Bacterial ribosomal protein S20 interacts with 16S rRNA.
CD-Length = 84 residues, 98.8% aligned
Score = 58.9 bits (142), Expect = 2e-10
Identities = 42/83 (50%), Positives = 53/83 (63%)