ViewGene
Locus Name:
GeneID:
Location:

GeneID:5201
TrivialName: PA14_51920
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_51920
PAO1 Ortholog Locus:PA0954
Sequence Length:276
Protein Length:91
Start: 4611102
Stop: 4610827
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04343.1|AE004529_9 (AE004529) probable acylphosphatase [Pseudomonas aeruginosa PAO1]
Identities = 90/91 (98%), Positives = 91/91 (100%)
Sequence:
ATGGCGAGGATCTGCTTGCATGCCTATGTCGGCGGCCGGGTACAGGGCGTCGGTTTCCGTCAGGCGACCCGG
GAAGAGGCTGATCGCCTCGAACTCGACGGTTGGGTGCGAAACCTGGATGACGGGCGTGTCGAGGTCGTCTGG
GAGGGCGAGGAGGACCGGGCGAAAGCCCTGGAGCGATGGCTGGGGCGGGGCCCGCGGCACGCGGAGGTCTCT
GCGGTCGAGGTCGACCAAATGCCGCTGCAGGGGATCGCTGGCTTCGTCGTCCGTCGCTGA
Translation:
MARICLHAYVGGRVQGVGFRQATREEADRLELDGWVRNLDDGRVEVVWEGEEDRAKALERWLGRGPRHAEVS
AVEVDQMPLQGIAGFVVRR*
AnnotationID:5206GeneID:5201
AnnotatorUID: danlee
Modification Date/Time: 2004-05-11 15:03:18
Gene Name:
Confidence Code:3
GeneProduct:probable acylphosphatase
Cell Localization:()
Synonyms:PA0954
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:probable acylphosphate phosphohydrolase 
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
COG1254, AcyP, Acylphosphatases [Energy production and conversion]
       CD-Length = 92 residues, 100.0% aligned
       Score = 94.1 bits (234), Expect = 2e-21






   
Genomic Context:






   
Comment:


















    ReferenceID:10402




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:27547




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:5201
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
7611
                           PA0954_tr
                           translation of PA0954
                           91
                           98.90
                           99.99
                           0
                           474.0
     

     
     
194920
                           gb|AAG04343.1|AE004529_9
                           (AE004529) probable acylphosphatase [Pseudomonas aeruginosa PAO1]
                           91
                           98.90
                           99.99
                           0
                           474.0
     

     






      

          
GC ORFID: 48203How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA0954Glimmer Score: 

          
Start: 342805Stop: 343080

          
Length: 276


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA0954 translation of PA0954Homolog Bit Score 187.0

          
Other Homologs:  t_PA0954 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGGCGAGGATCTGCTTGCATGCCTATGTCGGCGGCCGGGTACAGGGCGTCGGTTTCCGTCAGGCGACCCGG 
GAAGAGGCTGATCGCCTCGAACTCGACGGTTGGGTGCGAAACCTGGATGACGGGCGTGTCGAGGTCGTCTGG 
GAGGGCGAGGAGGACCGGGCGAAAGCCCTGGAGCGATGGCTGGGGCGGGGCCCGCGGCACGCGGAGGTCTCT 
GCGGTCGAGGTCGACCAAATGCCGCTGCAGGGGATCGCTGGCTTCGTCGTCCGTCGCTGA