ViewGene

Locus Name:
GeneID:
Location:

GeneID:5110
TrivialName: PA14_04850
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_04850
PAO1 Ortholog Locus:PA0369
Sequence Length:291
Protein Length:96
Start: 428402
Stop: 428112
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG03758.1|AE004474_10 (AE004474) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 96/96 (100%), Positives = 96/96 (100%)
Sequence:
GTGGCCGACCAGGGCGCCGACCCTTTCATCCTCGAGACCGGCAGCGGGCGCATACTCTTCGACCTGCATGGC
GGCAGGGGCTGGGACCCGGCCCCGTGCTTCGACGACCTGTGGCAGATGGCGGCCAGCCTGGCCTGCTTCGGC
GAGGTCTGGAGCGGCGCCGGCGAGGACATCCTGCTGGACGACTGCAGCGTCGCGCCCCGCTATCGGCAGCAG
CTCGTCGACGAACTGCAACCGATCCTCGGTTCGCGCCAGCGGGCGGAGGACCTCGCCGACGAGTTCGGCTGG
TAA
Translation:
MADQGADPFILETGSGRILFDLHGGRGWDPAPCFDDLWQMAASLACFGEVWSGAGEDILLDDCSVAPRYRQQ
LVDELQPILGSRQRAEDLADEFGW*
AnnotationID:5115GeneID:5110
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 05:05:18
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA0369
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15254
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:27364
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:5110

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7517 PA0369_tr translation of PA0369 96 99.99 99.99 0 525.0
193301 gb|AAG03758.1|AE004474_10 (AE004474) hypothetical protein PA0369 [Pseudomonas aeruginosa PAO1] 96 98.95 99.99 0 522.0
GC ORFID: 48112How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0369Glimmer Score:
Start: 6229744Stop: 6229454
Length: 291
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: t_PA0369 translation of PA0369Homolog Bit Score 206.0
Other Homologs: t_PA0369 (ORF: GLIMMER)
GC ORF Sequence
GTGGCCGACCAGGGCGCCGACCCTTTCATCCTCGAGACCGGCAGCGGGCGCATACTCTTCGACCTGCATGGC
GGCAGGGGCTGGGACCCGGCCCCGTGCTTCGACGACCTGTGGCAGATGGCGGCCAGCCTGGCCTGCTTCGGC
GAGGTCTGGAGCGGCGCCGGCGAGGACATCCTGCTGGACGACTGCAGCGTCGCGCCCCGCTATCGGCAGCAG
CTCGTCGACGAACTGCAACCGATCCTCGGTTCGCGCCAGCGGGCGGAGGACCTCGCCGACGAGTTCGGCTGG
TAA