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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07956.1|AE004870_7 (AE004870) 50S ribosomal protein L21 [Pseudomonas aeruginosa PAO1]
Identities = 103/103 (100%), Positives = 103/103 (100%)
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Sequence:
ATGTACGCAGTGATTGTTACCGGTGGCAAGCAGCACAAAGTCACCGAAGGCGAATTCCTCAAGGTCGAGAAA
CTCGACGTCGCTACCGGCGAAGCGATCGATTTCGACCGCGTCCTGCTGGTTGCCAATGGCGAAGACGTGAAA
ATCGGCCTGCCGGTCGTCGAAGGTGCGAAGGTTACCGCTGAAGTGGTTTCCCACGGCCGTCACGACAAGGTC
CGCATCATCAAGTTCCGCCGTCGTAAGCACCACATGAAGCGTCAGGGCCACCGCCAGTGGTTCACTGAAATC
AAGATCACCGGCATTCAGGCCTAA |
Translation:
MYAVIVTGGKQHKVTEGEFLKVEKLDVATGEAIDFDRVLLVANGEDVKIGLPVVEGAKVTAEVVSHGRHDKV
RIIKFRRRKHHMKRQGHRQWFTEIKITGIQA* |
AnnotationID:5102 | GeneID:5097 |
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Modification Date/Time: |
2005-05-05 07:07:41 |
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GeneProduct: | ribosomal protein L21 |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN66313.1|AE016259_11 (AE016776) ribosomal protein L21 [Pseudomonas putida KT2440]
Length = 170
Score = 180 bits (457), Expect = 1e-45
Identities = 88/102 (86%), Positives = 94/102 (92%)
>gb|AAG58320.1|AE005547_6 (AE005547) 50S ribosomal subunit protein L21 [Escherichia coli
O157:H7 EDL933]
Length = 103
Score = 151 bits (382), Expect = 6e-37
Identities = 66/103 (64%), Positives = 90/103 (87%) |
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Structural Features: | COG0261, RplU, Ribosomal protein L21
[Translation, ribosomal structure and biogenesis]
CD-Length = 103 residues, 100.0% aligned
Score = 138 bits (350), Expect = 2e-34
Identities = 66/103 (64%), Positives = 82/103 (79%)
pfam00829, Ribosomal_L21p, Ribosomal prokaryotic L21 protein.
CD-Length = 96 residues, 100.0% aligned
Score = 125 bits (315), Expect = 2e-30
Identities = 53/96 (55%), Positives = 73/96 (76%) |
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