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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07209.1|AE004799_15 (AE004799) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 112/112 (100%), Positives = 112/112 (100%)
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Sequence:
ATGAGCTTTCTAATTCCCGCTGCCTACGCCGACGCAGCCGCTCCGGCAGCCGCTGGCCCGGCCGGCACCGGT
TTCGAGTGGGTCTTCCTGGTTGGTTTCCTGGTCATCTTCTACCTGATGATCTGGCGTCCCCAGGCCAAGCGC
GCCAAGGAACACAAGAACCTGCTGGGCAACCTGCAAAAAGGTGACGAAGTCGTCACTTCCGGCGGTATCGCC
GGCAAGGTGACCAAGGTCGCCGACGATTTCGTCGTCGTCGAGGTCTCCGACAACGTCGAGCTGAAGTTCCAG
AAGGCCGCGATTGCCGCGACCCTGCCGAAAGGCACCCTGAAAGCGATCTGA |
Translation:
MSFLIPAAYADAAAPAAAGPAGTGFEWVFLVGFLVIFYLMIWRPQAKRAKEHKNLLGNLQKGDEVVTSGGIA
GKVTKVADDFVVVEVSDNVELKFQKAAIAATLPKGTLKAI* |
AnnotationID:5032 | GeneID:5027 |
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Modification Date/Time: |
2005-04-24 15:03:51 |
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GeneProduct: | putative preprotein translocase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (19) Protein secretion/export apparatus |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN66459.1|AE016275_4 (AE016777) preprotein translocase, YajC subunit [Pseudomonas putida
KT2440]
Length = 111
Score = 198 bits (504), Expect = 4e-51
Identities = 100/112 (89%), Positives = 105/112 (93%), Gaps = 1/112 (0%)
>gb|AAO54935.1| (AE016860) preprotein translocase, YajC subunit [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 111
Score = 192 bits (487), Expect = 4e-49
Identities = 97/112 (86%), Positives = 102/112 (91%), Gaps = 1/112 (0%)
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Structural Features: | COG1862, YajC, Preprotein translocase subunit YajC
[Intracellular trafficking and secretion]
CD-Length = 97 residues, 99.0% aligned
Score = 119 bits (300), Expect = 1e-28
Identities = 48/96 (50%), Positives = 59/96 (61%)
pfam02699, YajC, Preprotein translocase subunit.
CD-Length = 84 residues, 92.9% aligned
Score = 88.3 bits (219), Expect = 3e-19
Identities = 38/78 (48%), Positives = 56/78 (71%), Gaps = 1/78 (1%) |
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