ViewGene

Locus Name:
GeneID:
Location:

GeneID:4938
TrivialName: PA14_68570
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_68570
PAO1 Ortholog Locus:PA5191
Sequence Length:357
Protein Length:118
Start: 6116265
Stop: 6116621
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG08576.1|AE004932_3 (AE004932) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 117/118 (99%), Positives = 118/118 (100%)
Sequence:
ATGAACAGGATGGGCCAACTGGCTTTGTTCGGTCTTCTTGTAGGAACTTCCAGCAACCTGTTCGCCGCCCCC
GGCAGCATCAGCGGCGTCATTCGCTTCACCGGCGCCATTGTCGAGCCACCATGCTCGATGAGCGCTCCCCGC
CAAGACGAAAGCAAGGGCAGTTTCCACCTCAGTGGCTGTCCCATGCAGGCGCGCACCGCGGAAGTCAGCATC
CGTTCGATGAAGACCGGCGAGGTGCGCCACTTGCAACCCAGCGATACGGTCATCGGTGAACGGGATTTCTCG
GCGCGCTATGAGCTGGCCGGAAGCGGTCGCCGCTCCGGCAACTACCTGATCACCGTCACCTACCCCTGA
Translation:
MNRMGQLALFGLLVGTSSNLFAAPGSISGVIRFTGAIVEPPCSMSAPRQDESKGSFHLSGCPMQARTAEVSI
RSMKTGEVRHLQPSDTVIGERDFSARYELAGSGRRSGNYLITVTYP*
AnnotationID:4943GeneID:4938
AnnotatorUID: diggins
Modification Date/Time: 2005-03-15 17:05:13
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA5191
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:9876
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:27017
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:4938

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7342 PA5191_tr translation of PA5191 118 99.15 99.99 0 599.0
190940 gb|AAG08576.1|AE004932_3 (AE004932) hypothetical protein PA5191 [Pseudomonas aeruginosa PAO1] 118 99.15 99.99 0 599.0
GC ORFID: 47940How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA5191Glimmer Score:
Start: 5379951Stop: 5380307
Length: 357
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA5191 translation of PA5191Homolog Bit Score 235.0
Other Homologs: t_PA5191 (ORF: GLIMMER)
GC ORF Sequence
ATGAACAGGATGGGCCAACTGGCTTTGTTCGGTCTTCTTGTAGGAACTTCCAGCAACCTGTTCGCCGCCCCC
GGCAGCATCAGCGGCGTCATTCGCTTCACCGGCGCCATTGTCGAGCCACCATGCTCGATGAGCGCTCCCCGC
CAAGACGAAAGCAAGGGCAGTTTCCACCTCAGTGGCTGTCCCATGCAGGCGCGCACCGCGGAAGTCAGCATC
CGTTCGATGAAGACCGGCGAGGTGCGCCACTTGCAACCCAGCGATACGGTCATCGGTGAACGGGATTTCTCG
GCGCGCTATGAGCTGGCCGGAAGCGGTCGCCGCTCCGGCAACTACCTGATCACCGTCACCTACCCCTGA