ViewGene

Locus Name:
GeneID:
Location:

GeneID:4905
TrivialName: PA14_14450
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_14450
PAO1 Ortholog Locus:PA3833
Sequence Length:369
Protein Length:122
Start: 1234922
Stop: 1234554
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG07220.1|AE004800_9 (AE004800) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 121/122 (99%), Positives = 121/122 (99%)
Sequence:
ATGGACAGCCACAAACCGACACAACCCCCGGAGCAGTTGCTCGATGATCTGGAGTCGATCCACGACCTGCTC
TACGAACGGAACGAGCCGCCCTTGCTGACCGAATCCTTCGAGCCGGACAACATTCCCCTGCTCTCCGACGTC
GTCTCCCCCGGTACCGCCCCCCGCGCGCCAGAGCCGCAGGCCGCGGCAGCCACCACGGCAGGGCTGGCGCCC
GCCGAACAGGAGCGCCTGGACGACGAGTTGCGAGCGTCCGCCGAACTCATCCTGCAGGAAGTCATCGACGAC
TTCGCCCCGCAGATCGAAGCCGAACTGCGCCGCCGCCTGCAAGCCCGCCTGGGTCGCCTGCTCGGCCAACGC
AACGGCTGA
Translation:
MDSHKPTQPPEQLLDDLESIHDLLYERNEPPLLTESFEPDNIPLLSDVVSPGTAPRAPEPQAAAATTAGLAP
AEQERLDDELRASAELILQEVIDDFAPQIEAELRRRLQARLGRLLGQRNG*
AnnotationID:4910GeneID:4905
AnnotatorUID: diggins
Modification Date/Time: 2005-04-24 21:09:39
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:PA3833
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:9810
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:26951
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:4905

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7310 PA3833_tr translation of PA3833 122 99.18 99.18 0 613.0
190318 gb|AAG07220.1|AE004800_9 (AE004800) hypothetical protein PA3833 [Pseudomonas aeruginosa PAO1] 122 99.18 99.18 0 613.0
GC ORFID: 47907How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA3833Glimmer Score:
Start: 3719016Stop: 3719384
Length: 369
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA3833 translation of PA3833Homolog Bit Score 240.0
Other Homologs: t_PA3833 (ORF: GLIMMER)
GC ORF Sequence
ATGGACAGCCACAAACCGACACAACCCCCGGAGCAGTTGCTCGATGATCTGGAGTCGATCCACGACCTGCTC
TACGAACGGAACGAGCCGCCCTTGCTGACCGAATCCTTCGAGCCGGACAACATTCCCCTGCTCTCCGACGTC
GTCTCCCCCGGTACCGCCCCCCGCGCGCCAGAGCCGCAGGCCGCGGCAGCCACCACGGCAGGGCTGGCGCCC
GCCGAACAGGAGCGCCTGGACGACGAGTTGCGAGCGTCCGCCGAACTCATCCTGCAGGAAGTCATCGACGAC
TTCGCCCCGCAGATCGAAGCCGAACTGCGCCGCCGCCTGCAAGCCCGCCTGGGTCGCCTGCTCGGCCAACGC
AACGGCTGA