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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04972.1|AE004586_10 (AE004586) succinate dehydrogenase (A subunit) [Pseudomonas aeruginosa PAO1]
Identities = 590/590 (100%), Positives = 590/590 (100%)
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Sequence:
ATGGCTAGCATTCGTACACTTTCCTTTGACGCCATCATCGTCGGTGGCGGTGGCGCCGGCATGCGTGCCGCG
CTGCAACTGGCCCAGGGCGGCCACAAGACCGCCGTGGTGACCAAGGTCTTCCCGACCCGTTCCCACACCGTA
TCCGCACAGGGCGGCATCACCTGCGCCATCGCTTCGGCCGACCCGAACGACGATTGGCGTTGGCACATGTAC
GACACCGTCAAGGGCTCCGACTACATCGGTGACCAGGACGCGATCGAATACATGTGTTCCGTCGGTCCCGAG
GCCGTGTTCGAGCTCGAGCACATGGGCCTGCCGTTCTCCCGTACCGAAACCGGCCGCATCTACCAGCGTCCG
TTCGGCGGCCAGTCCAAGGACTTCGGCAAGGGTGGCCAGGCCGCCCGTACCTGCGCCGCCGCCGACCGTACC
GGCCACGCGCTGCTGCACACCCTGTACCAGGCCAACCTGAAGAATGGCACCTCGTTCCTCAACGAGTGGTAC
GCGGTCGACCTGGTGAAGAACCAGGACGGCGCGGTGGTCGGCATCATCGCCATCTGCATCGAGACCGGCGAG
ACCGTCTATATCCGTTCCAAGGCCGTGGTCCTGGCCACTGGCGGTGCCGGCCGTATCTACGCCTCCACCACC
AACGCGCTGATCAACACCGGTGACGGCGTGGGCATGGCCCTGCGTGCCGGCGTGCCGGTGCAGGACATCGAG
ATGTGGCAGTTCCACCCGACCGGCATCGCCGGCGCCGGTGTACTGGTCACCGAAGGTTGCCGCGGCGAAGGC
GGCTACCTGATCAACGCCCACGGCGAGCGCTTCATGGAGCGTTATGCGCCGAACGCGAAGGACCTGGCCGGT
CGCGACGTGGTCGCTCGTTCCATGGTCAAGGAAGTCCTGGCCGGCAACGGCGTGGGCCCGAACAAGGACCAC
GTGCTGCTGAAACTCGACCACCTCGGCGAGGAAGTCCTGCACAGCCGCCTGCCCGGCATCTGCGAACTGTCC
AAGACCTTCGCCCACGTCGACCCGGTCGTCGCGCCGATCCCGGTGATCCCGACCTGCCACTACATGATGGGT
GGCGTTGCCACCAACATCCATGGCCAGGCCATCACCCAGGATGCCAATGGCAACGACCAGATCGTCGAAGGC
CTGTTCGCCGTAGGCGAAGTGGCCTGCGTATCGGTACACGGCGCCAACCGCCTGGGCGGCAACTCGCTGCTC
GACCTGGTGGTATTCGGCCGTGCCGCCGGTCTGCACCTGGAAAAAGCGCTGAAAGAAGGCATCGACGCCCGC
GGCGCTTCCGAGAGCGACCTGGAAGCCTCCTTCAAGCGCCTGAACGGCGTGAACGAGCGCACCAGCGGCGAA
GAAGTCGCTCCGCTCAAGCGCGAGCTGCAAAGCTGCATGCAGAACTACTTCGGTGTATTCCGCACCGGCGAG
TACATGCAGAAGGGCATCGCCCAGCTGGCCGACCTGCGCGAGCGTATCGCCAACGTCAAGATCAACGACAAG
AGCCAGGCATTCAACACCGCGCGCATCGAAGCGCTGGAACTGCAAAACCTCCTCGAGGTGGCCGAGGCCACC
GCGATCGCGGCCGAGCACCGCAAGGAGTCCCGTGGCGCCCACGCCCGTGAAGACTTCGAGGAGCGCGACGAC
GAGAACTGGCTGTGCCACACCCTGTACTTCCCGGGTGAGAAGCGCGTATCCAAGCGTTCCGTCAACTTCGCG
CCGAAGACCGTTCCGGCATTCGAACCCAAGGTTCGGACTTACTAA |
Translation:
MASIRTLSFDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADPNDDWRWHMY
DTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETGRIYQRPFGGQSKDFGKGGQAARTCAAADRT
GHALLHTLYQANLKNGTSFLNEWYAVDLVKNQDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTT
NALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAG
RDVVARSMVKEVLAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPIPVIPTCHYMMG
GVATNIHGQAITQDANGNDQIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKALKEGIDAR
GASESDLEASFKRLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKINDK
SQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHTLYFPGEKRVSKRSVNFA
PKTVPAFEPKVRTY* |
AnnotationID:499 | GeneID:490 |
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Modification Date/Time: |
2005-04-28 06:06:57 |
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GeneProduct: | succinate dehydrogenase (A subunit) |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (12) Energy metabolism |
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Alternate Gene Product Name: | succinate dehydrogenase, flavoprotein subunit |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN69772.1|AE016613_7 (AE016789) succinate dehydrogenase, flavoprotein subunit
[Pseudomonas putida KT2440]
Length = 590
Score = 1101 bits (2848), Expect = 0.0
Identities = 537/590 (91%), Positives = 566/590 (95%)
>gb|AAO55713.1| (AE016863) succinate dehydrogenase, flavoprotein subunit
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 590
Score = 1089 bits (2817), Expect = 0.0
Identities = 533/590 (90%), Positives = 562/590 (95%)
>gb|AAN79274.1|AE016757_178 (AE016757) Succinate dehydrogenase flavoprotein subunit
[Escherichia coli CFT073]
Length = 592
Score = 842 bits (2176), Expect = 0.0
Identities = 412/583 (70%), Positives = 477/583 (81%), Gaps = 3/583 (0%)
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Structural Features: | COG1053, SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[Energy production and conversion]
CD-Length = 562 residues, 99.6% aligned
Score = 624 bits (1611), Expect = 7e-180
Identities = 300/579 (51%), Positives = 381/579 (65%), Gaps = 26/579 (4%)
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