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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06820.1|AE004764_6 (AE004764) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 129/129 (100%), Positives = 129/129 (100%)
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Sequence:
ATGTTGCCCCCGCTCGTCCGCCGTCTGTCCCGCCTTGCCGCCGAACTGGCGGTACTCATCGCCTTCTGGTGG
GCCGGCGGCTGGCTGGCGAAGGCCATCGGCCTGCCGCTGCCGGGCGGGGTGGTCGGCCTGGCGGCGCTGTTG
CTGCTGTTCGCCAGCGGCCTGCTGCGTCCGGCCTGGCTGCAGGCCGGCGCCGGCCTGTTGCTGGCGGAGATG
TTGCTGTTCTTCATCCCGGCGCTGATGAGCCTGCTCGACTACGGCGCGCTGCTACGCAGCGAGGGCTGGCGC
ATCCTCCTGGTGATCATGCTCAGCACCCTGCTGGTGATGCTGGTCACCGCGGTGTCGGTGGAGTGGATGTGC
CGCTGGAGGGCGCGCCATGAGTCTCGATAA |
Translation:
MLPPLVRRLSRLAAELAVLIAFWWAGGWLAKAIGLPLPGGVVGLAALLLLFASGLLRPAWLQAGAGLLLAEM
LLFFIPALMSLLDYGALLRSEGWRILLVIMLSTLLVMLVTAVSVEWMCRWRARHESR* |
AnnotationID:4822 | GeneID:4817 |
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Modification Date/Time: |
2005-04-18 17:05:21 |
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GeneProduct: | putative murein hydrolase exporter |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (19) Protein secretion/export apparatus |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN70199.1|AE016659_5 (AE016791) LrgA family protein [Pseudomonas putida KT2440]
Length = 128
Score = 169 bits (429), Expect = 2e-42
Identities = 85/127 (66%), Positives = 104/127 (81%)
>gb|AAL52778.1| (AE009595) murein hydrolase exporter [Brucella melitensis 16M]
Length = 117
Score = 103 bits (256), Expect = 2e-22
Identities = 52/115 (45%), Positives = 78/115 (67%)
>gb|AAL23095.1| (AE008900) putative inner membrane protein [Salmonella typhimurium
LT2]
Length = 136
Score = 84.7 bits (208), Expect = 8e-17
Identities = 46/127 (36%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
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Structural Features: | pfam03788, LrgA, LrgA family. This family is uncharacterised. It contains
the protein LrgA that has been hypothesised to export murein hydrolases.
CD-Length = 110 residues, 100.0% aligned
Score = 85.6 bits (212), Expect = 2e-18
Identities = 45/110 (40%), Positives = 78/110 (70%)
COG1380, COG1380, Putative effector of murein hydrolase LrgA
CD-Length = 128 residues, 96.9% aligned
Score = 94.8 bits (236), Expect = 3e-21
Identities = 46/124 (37%), Positives = 83/124 (66%)
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