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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07628.1|AE004841_6 (AE004841) 30S ribosomal protein S11 [Pseudomonas aeruginosa PAO1]
Identities = 129/129 (100%), Positives = 129/129 (100%)
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Sequence:
ATGGCAAAACCTGCTGCTCGTCCCCGTAAGAAAGTCAAAAAGACAGTGGTCGATGGGATCGCCCACATCCAC
GCGTCTTTCAACAACACCATCGTGACCATCACCGACCGTCAGGGCAACGCACTGTCCTGGGCGACCTCCGGT
GGTTCCGGTTTCCGCGGCTCGCGTAAGAGCACCCCGTTCGCTGCCCAGGTAGCGGCCGAGCGTGCCGGCCAG
GCTGCCCTGGAATACGGTCTGAAGAACCTGGACGTCAACGTCAAGGGCCCGGGCCCGGGCCGCGAGTCCGCC
GTTCGCGCTCTGAATGCTTGCGGCTACAAGATCGCCAGCATCACCGACGTAACCCCGATCCCGCATAACGGC
TGCCGTCCGCcGAAAAAGCGTCGCGTGTAA |
Translation:
MAKPAARPRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTPFAAQVAAERAGQ
AALEYGLKNLDVNVKGPGPGRESAVRALNACGYKIASITDVTPIPHNGCRPPKKRRV* |
AnnotationID:4781 | GeneID:4776 |
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Modification Date/Time: |
2005-04-01 13:01:01 |
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GeneProduct: | ribosomal protein S11 |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO54191.1| (AE016858) ribosomal protein S11 [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 129
Score = 260 bits (665), Expect = 8e-70
Identities = 128/129 (99%), Positives = 128/129 (99%)
>gb|AAN66107.1|AE016239_2 (AE016775) ribosomal protein S11 [Pseudomonas putida KT2440]
Length = 129
Score = 260 bits (665), Expect = 8e-70
Identities = 127/129 (98%), Positives = 129/129 (100%)
>gb|AAN53339.1|AE015474_2 (AE015474) ribosomal protein S11 [Shewanella oneidensis MR-1]
Length = 130
Score = 227 bits (578), Expect = 1e-59
Identities = 112/130 (86%), Positives = 120/130 (92%), Gaps = 1/130 (0%)
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Structural Features: | COG0100, RpsK, Ribosomal protein S11 [Translation, ribosomal structure and biogenesis]
CD-Length = 129 residues, 100.0% aligned
Score = 186 bits (473), Expect = 9e-49
Identities = 91/129 (70%), Positives = 108/129 (83%)
pfam00411, Ribosomal_S11, Ribosomal protein S11.
CD-Length = 110 residues, 100.0% aligned
Score = 152 bits (385), Expect = 1e-38
Identities = 72/110 (65%), Positives = 88/110 (80%)
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