ViewGene
Locus Name:
GeneID:
Location:

GeneID:4769
TrivialName: PA14_55130
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_55130
PAO1 Ortholog Locus:PA0710
Sequence Length:396
Protein Length:131
Start: 4897827
Stop: 4897432
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04099.1|AE004506_9 (AE004506) lactoylglutathione lyase [Pseudomonas aeruginosa PAO1]
Identities = 130/131 (99%), Positives = 130/131 (99%)
Sequence:
ATGCGAATCCTGCACAGCATGCTCCGCGTGGCCGATCTCGAGGCCGCGCTGGAGTTCTACACCCGCGCCCTG
GACATGCGTCTGCTACGGCGCCGGGACTATCCCGAAGGCCGCTTCACCCTGGCCTTCGTCGGCTACCAGGAC
GAGCGCGCGGCCGCTGCCCTGGAGTTGACCCACAACTGGGACCGGGACGGCTACACCCAGGGCGACGGCTAC
GGCCACCTGGCCATCGAGGTCGAGGATGCCGCCGTCACCTGCGCCCGGGCCAGGGCGCTGGGCTATCGGGTC
ACCCGCGAGGCCGGGCCGATGCAGCACGGACGCAGCGTGATCGCCTTCCTCGAAGACCCGGACGGCTACAAG
GTGGAACTGATCCAGAAGGGTACCCAGTTCGATTGA
Translation:
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWDRDGYTQGDGY
GHLAIEVEDAAVTCARARALGYRVTREAGPMQHGRSVIAFLEDPDGYKVELIQKGTQFD*
AnnotationID:4774GeneID:4769
AnnotatorUID: danlee
Modification Date/Time: 2004-03-12 13:01:42
Gene Name:gloA2
Confidence Code:2
GeneProduct:lactoylglutathione lyase
Cell Localization:()
Synonyms:PA0710, lactoylglutathione lyase
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(8) Central intermediary metabolism
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
KOG2943, Predicted glyoxalase [Carbohydrate transport and metabolism]
   CD-Length = 299 residues, only  44.1% aligned
   Score = 80.4 bits (198), Expect = 1e-16






   
Genomic Context:






   
Comment:


















    ReferenceID:9538




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:26679




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:4769
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
7140
                           PA0710_tr
                           translation of PA0710
                           131
                           99.23
                           99.23
                           0
                           671.0
     

     
     
187391
                           gb|AAG04099.1|AE004506_9
                           (AE004506) lactoylglutathione lyase [Pseudomonas aeruginosa PAO1]
                           131
                           99.23
                           99.23
                           0
                           671.0
     

     
     
187396
                           emb|CAD85338.1|
                           (BX321861) possible gloA; lactoylglutathione lyase [Nitrosomonas europaea ATCC 19718]
                           131
                           63.35
                           77.09
                           2
                           452.0
     

     
     
187395
                           emb|CAE38943.1|
                           (BX640434) lactoylglutathione lyase [Bordetella parapertussis]
                           131
                           63.35
                           80.15
                           0
                           454.0
     

     
     
187394
                           emb|CAE34457.1|
                           (BX640449) lactoylglutathione lyase [Bordetella bronchiseptica] [Bordetella bronchiseptica RB50]
                           131
                           63.35
                           80.15
                           0
                           454.0
     

     






      

          
GC ORFID: 47771How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA0710Glimmer Score: 

          
Start: 56080Stop: 56475

          
Length: 396


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA0710 translation of PA0710Homolog Bit Score 263.0

          
Other Homologs:  t_PA3524 (ORF: BLASTX 168.0), t_PA0710 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGCGAATCCTGCACAGCATGCTCCGCGTGGCCGATCTCGAGGCCGCGCTGGAGTTCTACACCCGCGCCCTG 
GACATGCGTCTGCTACGGCGCCGGGACTATCCCGAAGGCCGCTTCACCCTGGCCTTCGTCGGCTACCAGGAC 
GAGCGCGCGGCCGCTGCCCTGGAGTTGACCCACAACTGGGACCGGGACGGCTACACCCAGGGCGACGGCTAC 
GGCCACCTGGCCATCGAGGTCGAGGATGCCGCCGTCACCTGCGCCCGGGCCAGGGCGCTGGGCTATCGGGTC 
ACCCGCGAGGCCGGGCCGATGCAGCACGGACGCAGCGTGATCGCCTTCCTCGAAGACCCGGACGGCTACAAG 
GTGGAACTGATCCAGAAGGGTACCCAGTTCGATTGA