ViewGene

Locus Name:
GeneID:
Location:

GeneID:4762
TrivialName: PA14_35160
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_35160
PAO1 Ortholog Locus:PA2274
Sequence Length:378
Protein Length:125
Start: 3128975
Stop: 3128598
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05662.1|AE004653_5 (AE004653) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 124/125 (99%), Positives = 124/125 (99%)
Sequence:
ATGCTCATCCCCTCCTCCTACTGCTGCACCGACGACCAGTGCCCGGCCGCTAGCGAGCGGTCGCCGTGCTAC
GCGCAACTCATCGATATCGAGGTGGAACCCGCCAGCCAGTTGTCGCTGGCGCTGGAACAGAACGCGCACCTG
CAACGCCTGGAACGCTGCTTCAGGAACTGCCCGGGCTACCTGTCCGCCAGCCTGCACCCCAGCGAGGACGGC
CAGCACGTGCTGAACTACACCTGCTGGCGTTCACGCGAGGACTGCGAACGCGCCTGGCAAGCCCGGGAGGAC
GCGCAAGGCCCGCTGAGCGCGGGCGTCTGGCGGCTGGGGGCGAAAAGCGTGCGTTTCGAGACCTTCCTGGTC
GACGCCGAGGGCTGCTGA
Translation:
MLIPSSYCCTDDQCPAASERSPCYAQLIDIEVEPASQLSLALEQNAHLQRLERCFRNCPGYLSASLHPSEDG
QHVLNYTCWRSREDCERAWQAREDAQGPLSAGVWRLGAKSVRFETFLVDAEGC*
AnnotationID:4767GeneID:4762
AnnotatorUID: diggins
Modification Date/Time: 2005-03-04 09:09:24
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA2274
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:9524
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:26665
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:4762

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7133 PA2274_tr translation of PA2274 125 99.20 99.20 0 676.0
187359 gb|AAG05662.1|AE004653_5 (AE004653) hypothetical protein PA2274 [Pseudomonas aeruginosa PAO1] 125 99.20 99.20 0 676.0
GC ORFID: 47764How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA2274Glimmer Score:
Start: 1824941Stop: 1825318
Length: 378
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA2274 translation of PA2274Homolog Bit Score 265.0
Other Homologs: t_PA2274 (ORF: GLIMMER)
GC ORF Sequence
ATGCTCATCCCCTCCTCCTACTGCTGCACCGACGACCAGTGCCCGGCCGCTAGCGAGCGGTCGCCGTGCTAC
GCGCAACTCATCGATATCGAGGTGGAACCCGCCAGCCAGTTGTCGCTGGCGCTGGAACAGAACGCGCACCTG
CAACGCCTGGAACGCTGCTTCAGGAACTGCCCGGGCTACCTGTCCGCCAGCCTGCACCCCAGCGAGGACGGC
CAGCACGTGCTGAACTACACCTGCTGGCGTTCACGCGAGGACTGCGAACGCGCCTGGCAAGCCCGGGAGGAC
GCGCAAGGCCCGCTGAGCGCGGGCGTCTGGCGGCTGGGGGCGAAAAGCGTGCGTTTCGAGACCTTCCTGGTC
GACGCCGAGGGCTGCTGA