ViewGene

Locus Name:
GeneID:
Location:

GeneID:4740
TrivialName: PA14_03510
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_03510
PAO1 Ortholog Locus:PA0270
Sequence Length:408
Protein Length:135
Start: 320329
Stop: 320736
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG03659.1|AE004465_5 (AE004465) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 132/135 (97%), Positives = 132/135 (97%)
Sequence:
ATGAAGGCCAATCGATCGATCGCCTGCCTGCTGCTCGCCGCGCTGCCGACGCTGGCCAGCGCCCATGCTGCG
GAGAAGGTGGAAACCTTGCGCGACCAGGCCCTGGCCGAGATTCCCGGCCATCGTGGGTTGATGCTGACGGTG
TCGTTCAAGCCCGGCCAGGTCTCCGCGCCCCATGTGCATCCCGGCTCGGTGTTCGTCTACGTGCTCGAAGGC
ACCGTGCAGACGCAACTGGAAGGCGGCCCGGTGGAAACCTACACGGTGGGCCAGAGCTGGTACGAGCCGGCG
AACGTGCCGCACCTGCTGGCACGCAATCCCGATCCGATGAAGCCGGCCAAGTTGCTGGTCTGGGAGTTGCTC
AAGGAGGGCGACCCGATCCTCAAGCCACTGGAGCGCGGCGCCCACTGA
Translation:
MKANRSIACLLLAALPTLASAHAAEKVETLRDQALAEIPGHRGLMLTVSFKPGQVSAPHVHPGSVFVYVLEG
TVQTQLEGGPVETYTVGQSWYEPANVPHLLARNPDPMKPAKLLVWELLKEGDPILKPLERGAH*
AnnotationID:4745GeneID:4740
AnnotatorUID: diggins
Modification Date/Time: 2005-03-24 05:05:51
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:PA0270
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:9481
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:26621
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:33615
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:4740_cdd.html
URL:
Homologs By Global Alignment
Gene ID:4740

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7110 PA0270_tr translation of PA0270 135 97.77 97.77 0 687.0
186987 gb|AAG03659.1|AE004465_5 (AE004465) hypothetical protein PA0270 [Pseudomonas aeruginosa PAO1] 135 97.77 97.77 0 687.0
GC ORFID: 47742How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0270Glimmer Score:
Start: 6121670Stop: 6122077
Length: 408
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA0270 translation of PA0270Homolog Bit Score 269.0
Other Homologs:
GC ORF Sequence
ATGAAGGCCAATCGATCGATCGCCTGCCTGCTGCTCGCCGCGCTGCCGACGCTGGCCAGCGCCCATGCTGCG
GAGAAGGTGGAAACCTTGCGCGACCAGGCCCTGGCCGAGATTCCCGGCCATCGTGGGTTGATGCTGACGGTG
TCGTTCAAGCCCGGCCAGGTCTCCGCGCCCCATGTGCATCCCGGCTCGGTGTTCGTCTACGTGCTCGAAGGC
ACCGTGCAGACGCAACTGGAAGGCGGCCCGGTGGAAACCTACACGGTGGGCCAGAGCTGGTACGAGCCGGCG
AACGTGCCGCACCTGCTGGCACGCAATCCCGATCCGATGAAGCCGGCCAAGTTGCTGGTCTGGGAGTTGCTC
AAGGAGGGCGACCCGATCCTCAAGCCACTGGAGCGCGGCGCCCACTGA