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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04992.1|AE004588_5 (AE004588) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 138/139 (99%), Positives = 138/139 (99%)
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Sequence:
ATGTCCCGTACCACCCCGTACCGCCTCGACGACCAGATCGGCTTCATCCTGCGCCAGGCCAACCAGCGCTAT
GCAGCGTTGTTCGCCAATGGCATCGGCAACGGCCTGACACCCACCCAGTGGGCCGCCCTGGTCCGCCTCGGC
GAGACCGGACCCTGCCCGCAGAACCAGCTCGGCCGGCTCACCGCCATGGACGCCGCGACCATCAAGGGCGTC
GTCGAGCGCCTGGACAAACGGGGACTGATCCAGCGCAGCGCCGATCCGGACGACGGCCGGCGCCTGCTGGTC
AGCCTCAGTCCTGCCGGACGCGCCGAACTCGAGGCCGGCCTGGCGGCCGCCCGCGAGATCAACCGGCAGGCC
TTGGCTCCCCTCTCCCCGCAAGAACAGGAAACCCTGCGCGGGTTGCTCGCTCGCCTGACCTGA |
Translation:
MSRTTPYRLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGV
VERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSPQEQETLRGLLARLT* |
AnnotationID:4742 | GeneID:4737 |
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Modification Date/Time: |
2005-02-25 17:05:31 |
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GeneProduct: | putative transcriptional regulator |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >dbj|BAC49094.1| (AP005949) transcriptional regulatory protein [Bradyrhizobium
japonicum USDA 110]
Length = 151
Score = 159 bits (403), Expect = 2e-39
Identities = 81/134 (60%), Positives = 100/134 (74%)
>dbj|BAB51433.1| (AP003005) transcriptional regulator [Mesorhizobium loti]
Length = 153
Score = 129 bits (323), Expect = 4e-30
Identities = 71/133 (53%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
>gb|AAN69540.1|AE016587_6 (AE016788) transcriptional regulator, MarR family [Pseudomonas
putida KT2440]
Length = 158
Score = 95.1 bits (235), Expect = 6e-20
Identities = 53/136 (38%), Positives = 84/136 (61%), Gaps = 1/136 (0%) |
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Structural Features: | pfam01047, MarR, MarR family.
CD-Length = 104 residues, 100.0% aligned
Score = 87.2 bits (216), Expect = 6e-19
Identities = 44/104 (42%), Positives = 63/104 (60%)
smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein
CD-Length = 101 residues, 94.1% aligned
Score = 76.8 bits (189), Expect = 9e-16
Identities = 38/95 (40%), Positives = 57/95 (60%)
COG1846, MarR, Transcriptional regulators [Transcription]
CD-Length = 126 residues, 84.1% aligned
Score = 72.7 bits (177), Expect = 2e-14
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 1/106 (0%) |
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