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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07644.1|AE004841_22 (AE004841) 50S ribosomal protein L16 [Pseudomonas aeruginosa PAO1]
Identities = 137/137 (100%), Positives = 137/137 (100%)
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Sequence:
ATGCTGCAACCCAAGCGTACGAAGTTCCGCAAACAAATGACCGGCCACAACCGTGGTCTGGCTCATCGTGGT
AGTAAGGTCAGCTTCGGTGAGTACGCACTGAAGGCCACTAGCCGTGGCCGCCTTACTGCTCGTCAGATCGAG
TCCGCGCGTCGTGCGCTGACCCGTCACGTGAAGCGTGGCGGCAAGATCTGGATCCGCGTATTCCCTGACAAG
CCTGTCACCAAGAAGCCCCTCGAAGTTCGTATGGGTAAAGGTAAGGGTGGGGTCGAGTACTGGGTAGCCCAG
ATCCAGCCGGGCAAGGTCCTGTACGAGATCGAGGGTGTTTCCGAAGAGCTGGCGCGTGAGGCTTTCGCCCTG
GCTGCTGCAAAGCTGCCCCTCGCCACCTCCTTTGTTAAGCGGACGGTGATGTGA |
Translation:
MLQPKRTKFRKQMTGHNRGLAHRGSKVSFGEYALKATSRGRLTARQIESARRALTRHVKRGGKIWIRVFPDK
PVTKKPLEVRMGKGKGGVEYWVAQIQPGKVLYEIEGVSEELAREAFALAAAKLPLATSFVKRTVM* |
AnnotationID:4713 | GeneID:4707 |
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Modification Date/Time: |
2005-04-03 11:11:05 |
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GeneProduct: | 50S ribosomal protein L16 |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | translation, ribosomal structure and biogenesis |
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Homology: | >gb|AAN66091.1|AE016238_9 (AE016775) ribosomal protein L16 [Pseudomonas putida KT2440]
Length = 137
Score = 259 bits (663), Expect = 1e-69
Identities = 130/137 (94%), Positives = 134/137 (97%)
>gb|AAO54175.1| (AE016858) ribosomal protein L16 [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 137
Score = 259 bits (662), Expect = 2e-69
Identities = 130/137 (94%), Positives = 134/137 (97%)
>gb|AAN53323.1|AE015473_10 (AE015473) ribosomal protein L16 [Shewanella oneidensis MR-1]
Length = 136
Score = 214 bits (546), Expect = 5e-56
Identities = 106/137 (77%), Positives = 119/137 (86%), Gaps = 1/137 (0%) |
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Structural Features: | pfam00252, Ribosomal_L16, Ribosomal protein L16.
CD-Length = 132 residues, 100.0% aligned
Score = 188 bits (478), Expect = 2e-49
Identities = 89/132 (67%), Positives = 108/132 (81%)
COG0197, RplP, Ribosomal protein L16/L10E
[Translation, ribosomal structure and biogenesis]
CD-Length = 146 residues, 93.2% aligned
Score = 178 bits (453), Expect = 2e-46
Identities = 86/136 (63%), Positives = 103/136 (75%), Gaps = 2/136 (1%) |
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