ViewGene

Locus Name:
GeneID:
Location:

GeneID:4703
TrivialName: PA14_52440
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_52440
PAO1 Ortholog Locus:PA0914
Sequence Length:393
Protein Length:130
Start: 4653628
Stop: 4654020
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04303.1|AE004525_11 (AE004525) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 130/130 (100%), Positives = 130/130 (100%)
Sequence:
GTGGCTGAACGCGCGGAGCCGCTGCTGGCGGTTCTGCTCCAGGCGCCGCCCTGCGTCGACCCCTGGTTCCTG
GAGTGCCGCCAGGATCGCGCCGGCCTCACCATCCTCGTCCGCGACCTCGCCAACCAGCGCACCTGGCGCGTC
GAGTTCGTCGAAGTCGAAGGCCTGCGCCAGCTCGACGCTGCCGACCTGCTGGAATTCTGGCCAGCCTGTGCG
GCGTCCGAGGGTTGGCTGTACCGGGTCGAGCAAGGCGGCTGGCTGGACCAGGAATGCCGTCGCGAGGGCTTC
GTCGCCCGCGAGACCAAGGCCGTCGACGAGTATTTCGTCAATGGCGGCGATCGCTGCCTGAGCGTGCTGTCC
TGGTCGCCACCGAAGGTTTCCCCGCTGATCTGA
Translation:
MAERAEPLLAVLLQAPPCVDPWFLECRQDRAGLTILVRDLANQRTWRVEFVEVEGLRQLDAADLLEFWPACA
ASEGWLYRVEQGGWLDQECRREGFVARETKAVDEYFVNGGDRCLSVLSWSPPKVSPLI*
AnnotationID:4709GeneID:4703
AnnotatorUID: danlee
Modification Date/Time: 2004-05-06 15:03:00
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA0914
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15162
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:26547
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:4703

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7072 PA0914_tr translation of PA0914 130 99.99 99.99 0 699.0
186568 gb|AAG04303.1|AE004525_11 (AE004525) hypothetical protein PA0914 [Pseudomonas aeruginosa PAO1] 130 99.23 99.99 0 696.0
GC ORFID: 47705How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0914Glimmer Score:
Start: 300279Stop: 299887
Length: 393
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA0914 translation of PA0914Homolog Bit Score 273.0
Other Homologs: t_PA0914 (ORF: GLIMMER)
GC ORF Sequence
GTGGCTGAACGCGCGGAGCCGCTGCTGGCGGTTCTGCTCCAGGCGCCGCCCTGCGTCGACCCCTGGTTCCTG
GAGTGCCGCCAGGATCGCGCCGGCCTCACCATCCTCGTCCGCGACCTCGCCAACCAGCGCACCTGGCGCGTC
GAGTTCGTCGAAGTCGAAGGCCTGCGCCAGCTCGACGCTGCCGACCTGCTGGAATTCTGGCCAGCCTGTGCG
GCGTCCGAGGGTTGGCTGTACCGGGTCGAGCAAGGCGGCTGGCTGGACCAGGAATGCCGTCGCGAGGGCTTC
GTCGCCCGCGAGACCAAGGCCGTCGACGAGTATTTCGTCAATGGCGGCGATCGCTGCCTGAGCGTGCTGTCC
TGGTCGCCACCGAAGGTTTCCCCGCTGATCTGA