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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04674.1|AE004558_3 (AE004558) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 145/149 (97%), Positives = 146/149 (97%)
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Sequence:
TTGACCGTCGAGAGGTACGGGTATATACACGCACCCATGCTACCGACCCAATGCCTCTGTACCAAACTGCGT
CGCGCCGCCCGCAGCGTTTCCCGCTTCTACGACGAGGCGCTGGCCGATACCGGCCTCAAGGTGGCGCAGTTT
TCCCTGCTGCGGCACCTGCAGCGCCTGGACCGGCCGAGCATTTCCGAACTCGCCGAAGCCATGGGACTCGAC
CGCAGCACCCTCGGTCGCAACCTGCGGGTGCTGGAAGGCGACGGCCTGCTGCGCCTGACCGGTGGCGAGGAC
CAGCGCAACCGCCTGGTCGAGCTGACGCCTGCCGGGCTGGATGCCCTGGAGCGCGGAACGCCGGCCTGGGAA
GACGCGCAGCGGCGTCTCGCCGGGCGCCTTGGCGAGGAGCGCAGCGGCGCCTTGGCGGCGTTGCTGGTGGAA
CTGGAGCGACTGGACTGA |
Translation:
MTVERYGYIHAPMLPTQCLCTKLRRAARSVSRFYDEALADTGLKVAQFSLLRHLQRLDRPSISELAEAMGLD
RSTLGRNLRVLEGDGLLRLTGGEDQRNRLVELTPAGLDALERGTPAWEDAQRRLAGRLGEERSGALAALLVE
LERLD* |
AnnotationID:4644 | GeneID:4638 |
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Modification Date/Time: |
2005-02-22 19:07:43 |
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GeneProduct: | putative transcriptional regulator, MarR family |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN67304.1|AE016356_12 (AE016780) transcriptional regulator, MarR family [Pseudomonas
putida KT2440]
Length = 134
Score = 165 bits (418), Expect = 7e-41
Identities = 88/133 (66%), Positives = 100/133 (75%)
>gb|AAN30478.1|AE014451_9 (AE014451) transcriptional regulator, MarR family [Brucella suis
1330]
Length = 136
Score = 114 bits (284), Expect = 2e-25
Identities = 61/133 (45%), Positives = 80/133 (60%)
>gb|AAL44009.1| (AE009249) transcriptional regulator, MarR family [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 133
Score = 112 bits (280), Expect = 7e-25
Identities = 58/129 (44%), Positives = 81/129 (62%)
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Structural Features: | smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.
CD-Length = 101 residues, 98.0% aligned
Score = 57.5 bits (139), Expect = 6e-10
Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
pfam01047, MarR, MarR family.
CD-Length = 104 residues, 100.0% aligned
Score = 53.7 bits (129), Expect = 9e-09
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
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