ViewGene

Locus Name:
GeneID:
Location:

GeneID:4635
TrivialName: PA14_16140
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_16140
PAO1 Ortholog Locus:PA3732
Sequence Length:444
Protein Length:147
Start: 1374776
Stop: 1375219
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG07119.1|AE004792_4 (AE004792) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 147/147 (100%), Positives = 147/147 (100%)
Sequence:
ATGACGGAAGCCCGGGTATGGAACGCTCGCTCGCTGGCCGAGGCCCTGAGCGGCACCGAGCTGTTCAGCAGC
GGCGAGGCCCAGATCGAGCTGATCGAGGGGGCGGAAGCGAGTCTCTATGTGATCATGCGCGAATACGGCGAC
CTGCCGGTGTTCGTCGCGCCCCAGGGCGAGCAGATCATCGTCGAGGCGCTGCTCTGGCCGGAAAGCGACGTT
ACCGACGCGACCGCCTTCAACGAAGAGGTCCTGCTCAGCCGGCAACTGTTCCCGCTGTCGAGCATCGGCCTG
CTCAACCTGCCGGGCGAGGAGCGCTGCTACAGCATGTTCGGCGCGTTGAGCACGACTTCGTCGCTGGCCAGC
GTGCTGCACGAAATCGAAACCCTGGCCGGCAACGTGATCCGCGCCACGGAAGTCTACGCCGGCTACCTGAAA
GCCCGGGCCTGA
Translation:
MTEARVWNARSLAEALSGTELFSSGEAQIELIEGAEASLYVIMREYGDLPVFVAPQGEQIIVEALLWPESDV
TDATAFNEEVLLSRQLFPLSSIGLLNLPGEERCYSMFGALSTTSSLASVLHEIETLAGNVIRATEVYAGYLK
ARA*
AnnotationID:4641GeneID:4635
AnnotatorUID: diggins
Modification Date/Time: 2005-04-22 08:08:30
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:PA3732
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:9271
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:26412
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:31824
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:4635_cdd.html
URL:
Homologs By Global Alignment
Gene ID:4635

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7003 PA3732_tr translation of PA3732 147 99.99 99.99 0 726.0
185577 gb|AAG07119.1|AE004792_4 (AE004792) conserved hypothetical protein [Pseudomonas aeruginosa PAO1] 147 99.99 99.99 0 726.0
185578 gb|AAO57256.1| (AE016869) conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] 219 26.94 40.63 74 281.0
GC ORFID: 47637How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA3732Glimmer Score:
Start: 3579161Stop: 3578718
Length: 444
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA3732 translation of PA3732Homolog Bit Score 284.0
Other Homologs: t_PA3732 (ORF: GLIMMER)
GC ORF Sequence
ATGACGGAAGCCCGGGTATGGAACGCTCGCTCGCTGGCCGAGGCCCTGAGCGGCACCGAGCTGTTCAGCAGC
GGCGAGGCCCAGATCGAGCTGATCGAGGGGGCGGAAGCGAGTCTCTATGTGATCATGCGCGAATACGGCGAC
CTGCCGGTGTTCGTCGCGCCCCAGGGCGAGCAGATCATCGTCGAGGCGCTGCTCTGGCCGGAAAGCGACGTT
ACCGACGCGACCGCCTTCAACGAAGAGGTCCTGCTCAGCCGGCAACTGTTCCCGCTGTCGAGCATCGGCCTG
CTCAACCTGCCGGGCGAGGAGCGCTGCTACAGCATGTTCGGCGCGTTGAGCACGACTTCGTCGCTGGCCAGC
GTGCTGCACGAAATCGAAACCCTGGCCGGCAACGTGATCCGCGCCACGGAAGTCTACGCCGGCTACCTGAAA
GCCCGGGCCTGA