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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04570.1|AE004548_4 (AE004548) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 1118/1120 (99%), Positives = 1119/1120 (99%)
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Sequence:
ATGTTCAGTGGCAAAACCGACGACAGGGGCTTGTGGGCGGGCATCCAGGCCGGTGTGCTGTTCTTTCTCGCC
GCCCTGGCCTGCATCTACCTGTCGCGCCAGCCTGCCACCATCGCGGCGATCTGGCTGCCCAACGCGATCCTC
ACCGCCGCCCTGCTGCGCGCGCCGCTGCGCCAGTGGCCGGCGATCCTGCTCTGCTCCGCCGTGGCCAACCTG
GCGGCCAACCGCCTGTATGGCGACAGCCTGTGGATGAGCGCGGCGTTCCTGCCGGCCAACCTGAGCGAAGCG
ATCTTCGCCGCGATGCTGTTACGCATCAACCGGGTGCGCGAGGACTTCGAGTTCAACCTGCATTCGGCGGTT
CGCGTGCTCTGGGCCGGCGCGCTGATCCCGCCCTTGCTCGGTGCCTCGGTGGGCGCGGTGCTGGTCAGCGTC
TTCGGCATGGGGCGTTTCCCGGAAATGTGGGCGCGCTGGTACGTGGGCGATGCGATGGGCATGCTCGCGCTG
CTGCCGTTGTGCATGGCCAGCAACCTGGCGGCCTGGCGTCACGCTCTGTCGGGGCGGGCGGGAGTGGACAAC
GCGATGCTCCTGCTGGTGACCCTGGTGATCAGCTTCGTGGCCCTGACGCGCCTGCCCTACGCCTTCATCTAC
GTGCTCCTGCCGCTGCTGGTGGCCGCCGCCAGCACCAGCGTGTTCGGCACCGCGCTGATCGGCTGCCTGAAC
ACCTGTTTCATCGCCGTGCTGATCGCCCTCGGCGTGTTCGTCCCCGAGTCGTCCCAGCAGCGTTTCGGCGAG
CCGCTGCTGTACCTGCCGATGGCCTTGACCCTCATTCCCGCCTTCCTGGTCTCGGTGATCATGGAGCGCAGC
CGCCGCGAGCAGCATCAGGTGGCCATCGGCGAGGCGCAGTTCCGCGGCGCCATGGAATTCTCGGCGATCGGC
ATGGCCCTGGTGTCGCTGGAGGGGCGGCTGTTCAAGGTCAACGAGGCGCTGTGCCGGATGCTCGGCTATTCC
GCCGAACGCTTGGGCGAGCTGTCGTTCCAGGAGATCACCTATGTGGACGACCTGGAACTGGACCTCGACCTG
GTGCGCGACCTGCTCGCCGGGCGTATCAACTCCTACCAGATGGAGAAGCGCTACCTGCGCCAGGACGGCGAA
ACCTTCTGGGCGCGCATCAGCGTGTCGCTGGTGCGCGATGAGGAGGGAGTCGCCCAGTACTTCGTCACCCAG
GTGGAGGATATCGACAGTCGCAAGCGTGCCGAGCTGGAGCGCGAGCGCCTCGCCGAACGGATCAAGCTGGCC
ACCGACGCCGGGCAGATCGGCATCTGGGAGTGGGACCTGGCGCGCAACCGCCTGCACTGGGATTTCCGCATG
TTCGACCTGTACGGCATCCGCAGCGGTCCCGGGGAGACCACGGTGGAGCAGTGGAAGGCGAGCCTGCATGCC
GAGGATCACGACCGCGTGCTGCGCGAGCTGGAGCGCGCCGTCAGCGGGTTGCAGAAATTCGACTGCGAGTTC
CGTATCGTCCGCCCCAACCGCGAGGTTCGCCACCTGCGGGCGATCGCCACGCTGACGCGCGACGAGGACAAC
CGTCCGGTGCGGATGATCGGCATCAACAGCGACATCACCGAGATCCGCACCCTGGCGGAAACCCTGCACGAG
GAAAAGGAACGCTTGCAGGTGACCCTGTATTCCATCGGCGATGCCGTGTTGACCACCGACGCCGGCGGCCGC
GTGACCTTCATGAACCCGGTGGCCGAGGCGATGACCGGCTGGACCTTGCAGGACGCCATCGGCGCGCCCCAC
GAACTGGTCTTCAACGTGCTCGACAGCGACACCGGCGAGGCCCTGGAAAGCCCGGTGCGACGCTGCCTGCAG
AACACCCGGGTGTTCTACCTGGAGGACGGCGCCACGCTGATCAGCCGCAAGGGCGAGCAGCACGATATCCAG
AATTGCGCGGCGCCGGTGCGCACCCGCGATGGCGAGATCATCGGCACCGTGCTGGTGTTCCAGAACGTCACC
AAGGCCCGGGCGATGCAGCGCGAGCTGAGCTATCACGCCTCCCACGATGCCCTCACCGGGCTGTTCAACCGC
ACCAAGTTCGAGGAGGAGCTGCAACGCGCCCTGGCCAACGCCCAGGAGCGGGCGACCCAGCATGCGCTGTGC
TTCATCGACCTCGACCGCTTCAAGGTGGTCAACGATTCCGCCGGGCACGCGGCGGGCGACATGCTGCTGCGC
GAGCTGAGCCGGATTCTCGCCGACCGTACCCGCGCCTCCGACACCCTGGCGCGGCTGGGCGGCGATGAGTTC
GGCCTGCTGCTGTTCGATTGCGACCTGGCGGAGGCGGAGCAGGTGGCGAGCAAGCTCATCGAGCAGATCTGC
TCGGTGCGCTTCCCCTGGGAAGGGCGGCTCTACGACGTGGGCGCGAGCATCGGTATCACCGCCCTTACCGCC
ACCTCGCGCAGCACCAGCGAACTGATGAGCCAGGCCGACGTGGCCTGCTACGCGGCCAAGCATGCCGGGCGC
AACCGGGTTTCGGTGTACCAGTTCGGCCATGAGGAAGTGGAGCGCCAGCACCGCGACATACTCCTCGCCAGC
GGGCTGCGCGAGGCCCTGGAGAACGACCGCTTCCAGTTGCAGGCGCAGGAGATCGTCCCGGTCGGCCCCCGC
CGCGACGGCGACCGGCACTACGAGCTGCTGCTGCGACTGTACGATCCGGATGGCCAGATGACTCCGCCGGGC
GCCTTCATCCCGGCCGCCGAGCGCTTCAACCTGATGGCCAGCATCGACCGCTGGGTGATCAACGAGGCGCTG
ATCAACTTCGGCGCGCGGATCGCCGCGGTGGAGGGCCTGAGCATCGGCATCAACCTGTCCGGCAACTCGCTC
AACGACCCGCTGTTCCTGCCTTACCTGCTGGATCGCATCGAACACTCGCCGCTGAGGCCGGAGCGCCTGTAC
TTCGAGCTGACCGAGACGGCGTTGATGAACCAGTTGTCGGTGGCTTCGCGGATCGTCGCCAAGCTGCGCGAC
CTCGGCTGCAAGGTGGCGTTGGACGACTTCGGCTCCGGCCTGAGTTCCTTCAATTACCTGAAGAATTTCGTC
GTCGACGTGATCAAGATCGACGGCAGCTTCGTCCGCAACCTGGACAAGAGCCCGGTGGACCAGGCCATCGTC
GACTCCATCAACCAGATCGCCCACCGCCTGGGCGCGGTGACCGTGGCCGAGTTCGTCGAGAGCCGGGAAATC
CTCGATCACCTGGCGCGCCTCGGGGTGGATTTCGCCCAGGGCTACGCGGTCGGTCGGCCGCAGCCGTTCGCC
ACGGTGCTCGACCAACTGCGCAGCGGGCTTCGTCGCCAGGAGTTGGGCTGA |
Translation:
MFSGKTDDRGLWAGIQAGVLFFLAALACIYLSRQPATIAAIWLPNAILTAALLRAPLRQWPAILLCSAVANL
AANRLYGDSLWMSAAFLPANLSEAIFAAMLLRINRVREDFEFNLHSAVRVLWAGALIPPLLGASVGAVLVSV
FGMGRFPEMWARWYVGDAMGMLALLPLCMASNLAAWRHALSGRAGVDNAMLLLVTLVISFVALTRLPYAFIY
VLLPLLVAAASTSVFGTALIGCLNTCFIAVLIALGVFVPESSQQRFGEPLLYLPMALTLIPAFLVSVIMERS
RREQHQVAIGEAQFRGAMEFSAIGMALVSLEGRLFKVNEALCRMLGYSAERLGELSFQEITYVDDLELDLDL
VRDLLAGRINSYQMEKRYLRQDGETFWARISVSLVRDEEGVAQYFVTQVEDIDSRKRAELERERLAERIKLA
TDAGQIGIWEWDLARNRLHWDFRMFDLYGIRSGPGETTVEQWKASLHAEDHDRVLRELERAVSGLQKFDCEF
RIVRPNREVRHLRAIATLTRDEDNRPVRMIGINSDITEIRTLAETLHEEKERLQVTLYSIGDAVLTTDAGGR
VTFMNPVAEAMTGWTLQDAIGAPHELVFNVLDSDTGEALESPVRRCLQNTRVFYLEDGATLISRKGEQHDIQ
NCAAPVRTRDGEIIGTVLVFQNVTKARAMQRELSYHASHDALTGLFNRTKFEEELQRALANAQERATQHALC
FIDLDRFKVVNDSAGHAAGDMLLRELSRILADRTRASDTLARLGGDEFGLLLFDCDLAEAEQVASKLIEQIC
SVRFPWEGRLYDVGASIGITALTATSRSTSELMSQADVACYAAKHAGRNRVSVYQFGHEEVERQHRDILLAS
GLREALENDRFQLQAQEIVPVGPRRDGDRHYELLLRLYDPDGQMTPPGAFIPAAERFNLMASIDRWVINEAL
INFGARIAAVEGLSIGINLSGNSLNDPLFLPYLLDRIEHSPLRPERLYFELTETALMNQLSVASRIVAKLRD
LGCKVALDDFGSGLSSFNYLKNFVVDVIKIDGSFVRNLDKSPVDQAIVDSINQIAHRLGAVTVAEFVESREI
LDHLARLGVDFAQGYAVGRPQPFATVLDQLRSGLRRQELG* |
AnnotationID:56 | GeneID:46 |
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Modification Date/Time: |
2006-02-05 15:03:39 |
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GeneProduct: | conserved hypothetical protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (14) Hypothetical, unclassified, unknown |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | Membrane proteins |
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Homology: | >gb|AAC75128.1| (AE000296) putative sensor-type protein [Escherichia coli K12]
Length = 1105
Score = 660 bits (1703), Expect = 0.0
Identities = 397/1090 (36%), Positives = 609/1090 (55%), Gaps = 19/1090 (1%)
>gb|AAN81050.1|AE016763_9 (AE016763) Hypothetical protein yegE [Escherichia coli CFT073]
Length = 1105
Score = 651 bits (1680), Expect = 0.0
Identities = 390/1096 (35%), Positives = 608/1096 (55%), Gaps = 17/1096 (1%)
>gb|AAN67381.1|AE016364_6 (AE016780) sensory box protein/GGDEF family protein [Pseudomonas
putida KT2440]
Length = 973
Score = 425 bits (1093), Expect = e-118
Identities = 238/569 (41%), Positives = 338/569 (59%), Gaps = 9/569 (1%) |
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Structural Features: | COG3447, Predicted integral membrane sensor domain
[Signal transduction mechanisms].
CD-Length = 308 residues, 98.4% aligned
Score = 309 bits (793), Expect = 1e-84
Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 3/303 (0%)
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