ViewGene

Locus Name:
GeneID:
Location:

GeneID: 449

TrivialName: PA14_09440

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_09440

PAO1 Ortholog Locus: PA4214

Sequence Length: 1884

Protein Length: 627

Start: 810259

Stop: 808376

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG07601.1|AE004838_5 (AE004838) phenazine biosynthesis protein PhzE [Pseudomonas aeruginosa PAO1] Identities = 624/627 (99%), Positives = 624/627 (99%)

Sequence:

ATGAACGCCCTGCCCACATCGCTGTTGCAGCGCCTGCTCGAACGGCCGGCGCCGTTCGCCTTGCTCTACCGC
CCGGAAAGCAATGGCCCGGGCCTGCTCGACGTGATTCGCGGCGAGACGCTCGAACTGCACGGCCTGGCCGAC
CTGCCACTGGACGAGCCCGGCCCGGGCCTGCCGCGCCATGACCTGCTGGCGCTGATTCCCTACCGGCAGATC
GCCGAGCGCGGCTTCGAGGCGCTCGACGACGGCACGCCGCTGCTGGCGCTGAAGGTTCTGGAGCAGGAACTG
CTGCCGTTGGAGCAGGCCCTGGCGCTGCTGCCGAACCAGGCGCTGGAACTGAGCGAGGAAGCTTTCGACCTC
GACGACGAGGCCTACGCCGAAGTGGTCGGGCGGGTCATCGCCGACGAGATCGGTCGCGGCGAAGGCGCCAAC
TTCGTGATCAAGCGGCGCTTCCAGGCGCGCATCGACGGCTACGCCACGGCCAGCGCGCTGAGTTTCTTCCGC
CAGTTGCTGCTGCGCGAGAAGGGCGCCTACTGGACCTTCATCGTCCACACCGGCGAACGCACCCTGGTCGGC
GCCTCGCCCGAGCGACACATCAGCGTGCGCGACGGCCTGGCGGTGATGAACCCGATCAGCGGCACCTACCGC
TACCCGCCGGCCGGGCCGAACCTGGCCGAGGTCATGGAATTCCTCGACAACCGCAAGGAAGCCGACGAGCTG
TACATGGTGGTGGACGAGGAGCTGAAGATGATGGCGCGGATCTGCGAGGACGGCGGCCGGGTGCTCGGTCCC
TACCTCAAGGAGATGGCGCACCTGGCGCACACCGAGTACTTCATCGAGGGCCAGACCAGCCGCGACGTGCGC
GAGGTGCTGCGCGAGACGCTGTTCGCCCCGACCGTCACCGGCAGCCCGCTGGAAAGCGCCTGCCGGGTGATC
CGCCGCTACGAGCCGCAGGGTCGCGGCTACTACAGCGGGGTGGCGGCGCTGATCGGCGGCGACGGCCAGGGC
GGGCGCACGCTGGACTCGGCGATCCTGATCCGCACCGCCGAGATCGAGAGCGACGGCCGCCTGCGCATCGGC
GTCGGCTCGACCATCGTGCGTCACTCCGATCCCCTGGGCGAGGCGGCGGAAAGCCGGGCCAAGGCTTCCGGG
CTGATCGCCGCGCTGAAGAGCCAGGCGCCGCAGCGCCTGGGCTCGCACCCGCACGTAGTGGCGGCGCTGGCC
AGCCGCAACGCGCCGATCGCCGACTTCTGGCTGCGCGGCGCCAGCGAGCGCCAGCAGTTGCAGGCCGACCTG
TCCGGACGCGAGGTGCTGATCGTCGACGCCGAGGACACCTTCACCTCGATGATCGCCAAGCAGCTCAAGTCG
CTGGGCCTGACGGTGACCGTGCGCGGCTTCCAGGAGCCGTACTCGTTCGACGGCTACGACCTGGTGATCATG
GGCCCCGGCCCGGGCAACCCCACCGAGATCGGCCAGCCGAAGATCGGCCACCTGCACCTGGCCATCCGTTCG
CTGCTCAGCGAGCGCCGGCCGTTCCTCGCCGTGTGCCTGAGCCACCAGGTGCTGAGCCTGTGCCTGGGCCTG
GACCTGCAACGCCGGCAGGAGCCCAACCAggGCGTGCAGAAACAGATCGACCTGTTCGGCGCCGCCGAGCGC
GTCGGCTTCTACAACACCTTCGCCGCGCGCGCCCTGCAGGACCGCATCGAGATCCCCGAGGTCGGCCCGATC
GAGATCAGCCGCGACCGCGAGACCGGCGAGGTCCATGCCCTGCGCGGGCCGCGCTTCGCCTCCATGCAATTC
CACCCCGAATCGGTGCTGACCCGCGAGGGTCCGCGCATCATCGCCGACCTGCTGCGCCACGCGCTGGTCGAG
CGGCGGCCCTGA

Translation:

MNALPTSLLQRLLERPAPFALLYRPESNGPGLLDVIRGETLELHGLADLPLDEPGPGLPRHDLLALIPYRQI
AERGFEALDDGTPLLALKVLEQELLPLEQALALLPNQALELSEEAFDLDDEAYAEVVGRVIADEIGRGEGAN
FVIKRRFQARIDGYATASALSFFRQLLLREKGAYWTFIVHTGERTLVGASPERHISVRDGLAVMNPISGTYR
YPPAGPNLAEVMEFLDNRKEADELYMVVDEELKMMARICEDGGRVLGPYLKEMAHLAHTEYFIEGQTSRDVR
EVLRETLFAPTVTGSPLESACRVIRRYEPQGRGYYSGVAALIGGDGQGGRTLDSAILIRTAEIESDGRLRIG
VGSTIVRHSDPLGEAAESRAKASGLIAALKSQAPQRLGSHPHVVAALASRNAPIADFWLRGASERQQLQADL
SGREVLIVDAEDTFTSMIAKQLKSLGLTVTVRGFQEPYSFDGYDLVIMGPGPGNPTEIGQPKIGHLHLAIRS
LLSERRPFLAVCLSHQVLSLCLGLDLQRRQEPNQGVQKQIDLFGAAERVGFYNTFAARALQDRIEIPEVGPI
EISRDRETGEVHALRGPRFASMQFHPESVLTREGPRIIADLLRHALVERRP*

AnnotationID:458 GeneID:449

AnnotatorUID: danlee

Modification Date/Time: 2003-11-12 16:04:53

Gene Name: phzE1

Confidence Code: 1

GeneProduct: phenazine biosynthesis protein PhzE

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (23) Secreted Factors (toxins, enzymes, alginate)

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Phenazine biosynthesis

Homology:

corresponds to PA4214 of PAO1 (based on sequence and genomic context).

Structural Features:

Genomic Context:

Operon phzA1B1C1D1E1F1G1

Comment:

ReferenceID:901

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:18043

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

Homologs By Global Alignment

Gene ID:449

Identity:

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score

767 PA4214_tr translation of PA4214 627 99.52 99.52 0 3177.0

768 PA1903_tr translation of PA1903 627 99.52 99.52 0 3177.0

33800 gb|AAG07601.1|AE004838_5 (AE004838) phenazine biosynthesis protein PhzE [Pseudomonas aeruginosa PAO1] 627 99.52 99.52 0 3177.0

33801 gb|AAG05292.1|AE004616_6 (AE004616) phenazine biosynthesis protein PhzE [Pseudomonas aeruginosa PAO1] 627 99.52 99.52 0 3177.0

33802 gb|AAC64488.1| (AF005404) PhzE [Pseudomonas aeruginosa] 627 99.52 99.52 0 3177.0

GC ORFID: `43451`	How Found: `BLASTX`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name: `t_PA4214`	Glimmer Score:
Start: `4143678`	Stop: `4145561`
Length: `1884`
Start Codon: `ATG`	Truncated Start:
Stop Codon: `TGA`	Truncated Stop:
Homolog: `t_PA4214 translation of PA4214`	Homolog Bit Score `1228.0`
Other Homologs: `t_PA1903 (ORF: BLASTX 1228.0), t_PA4214 (ORF: GLIMMER)`
GC ORF Sequence
ATGAACGCCCTGCCCACATCGCTGTTGCAGCGCCTGCTCGAACGGCCGGCGCCGTTCGCCTTGCTCTACCGC CCGGAAAGCAATGGCCCGGGCCTGCTCGACGTGATTCGCGGCGAGACGCTCGAACTGCACGGCCTGGCCGAC CTGCCACTGGACGAGCCCGGCCCGGGCCTGCCGCGCCATGACCTGCTGGCGCTGATTCCCTACCGGCAGATC GCCGAGCGCGGCTTCGAGGCGCTCGACGACGGCACGCCGCTGCTGGCGCTGAAGGTTCTGGAGCAGGAACTG CTGCCGTTGGAGCAGGCCCTGGCGCTGCTGCCGAACCAGGCGCTGGAACTGAGCGAGGAAGCTTTCGACCTC GACGACGAGGCCTACGCCGAAGTGGTCGGGCGGGTCATCGCCGACGAGATCGGTCGCGGCGAAGGCGCCAAC TTCGTGATCAAGCGGCGCTTCCAGGCGCGCATCGACGGCTACGCCACGGCCAGCGCGCTGAGTTTCTTCCGC CAGTTGCTGCTGCGCGAGAAGGGCGCCTACTGGACCTTCATCGTCCACACCGGCGAACGCACCCTGGTCGGC GCCTCGCCCGAGCGACACATCAGCGTGCGCGACGGCCTGGCGGTGATGAACCCGATCAGCGGCACCTACCGC TACCCGCCGGCCGGGCCGAACCTGGCCGAGGTCATGGAATTCCTCGACAACCGCAAGGAAGCCGACGAGCTG TACATGGTGGTGGACGAGGAGCTGAAGATGATGGCGCGGATCTGCGAGGACGGCGGCCGGGTGCTCGGTCCC TACCTCAAGGAGATGGCGCACCTGGCGCACACCGAGTACTTCATCGAGGGCCAGACCAGCCGCGACGTGCGC GAGGTGCTGCGCGAGACGCTGTTCGCCCCGACCGTCACCGGCAGCCCGCTGGAAAGCGCCTGCCGGGTGATC CGCCGCTACGAGCCGCAGGGTCGCGGCTACTACAGCGGGGTGGCGGCGCTGATCGGCGGCGACGGCCAGGGC GGGCGCACGCTGGACTCGGCGATCCTGATCCGCACCGCCGAGATCGAGAGCGACGGCCGCCTGCGCATCGGC GTCGGCTCGACCATCGTGCGTCACTCCGATCCCCTGGGCGAGGCGGCGGAAAGCCGGGCCAAGGCTTCCGGG CTGATCGCCGCGCTGAAGAGCCAGGCGCCGCAGCGCCTGGGCTCGCACCCGCACGTAGTGGCGGCGCTGGCC AGCCGCAACGCGCCGATCGCCGACTTCTGGCTGCGCGGCGCCAGCGAGCGCCAGCAGTTGCAGGCCGACCTG TCCGGACGCGAGGTGCTGATCGTCGACGCCGAGGACACCTTCACCTCGATGATCGCCAAGCAGCTCAAGTCG CTGGGCCTGACGGTGACCGTGCGCGGCTTCCAGGAGCCGTACTCGTTCGACGGCTACGACCTGGTGATCATG GGCCCCGGCCCGGGCAACCCCACCGAGATCGGCCAGCCGAAGATCGGCCACCTGCACCTGGCCATCCGTTCG CTGCTCAGCGAGCGCCGGCCGTTCCTCGCCGTGTGCCTGAGCCACCAGGTGCTGAGCCTGTGCCTGGGCCTG GACCTGCAACGCCGGCAGGAGCCCAACCAggGCGTGCAGAAACAGATCGACCTGTTCGGCGCCGCCGAGCGC GTCGGCTTCTACAACACCTTCGCCGCGCGCGCCCTGCAGGACCGCATCGAGATCCCCGAGGTCGGCCCGATC GAGATCAGCCGCGACCGCGAGACCGGCGAGGTCCATGCCCTGCGCGGGCCGCGCTTCGCCTCCATGCAATTC CACCCCGAATCGGTGCTGACCCGCGAGGGTCCGCGCATCATCGCCGACCTGCTGCGCCACGCGCTGGTCGAG CGGCGGCCCTGA