Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG04871.1| AE004577_6 (AE004577) cytochrome C-type biogenesis protein CcmH [Pseudomonas aeruginosa PAO1]
Identities = 154/155 (99%), Positives = 155/155 (100%)
Sequence:
ATGAAGCGTTTCCTCGCCACCGCGCTGCTCGGTATCGCCCTCTGCGGCGTGGCCCGGGCCGCCATCGACACC
TACGAGTTCGCCAGCGACGCCGAGCGCGAGCGCTTCCGCAACCTGACCCAGGAACTGCGCTGCCCGAAGTGC
CAGAACCAGGACATCGCCGACTCCAACGCACCGATCGCCGCCGACCTGCGCAAGCAGATCTACGGCCAGTTG
CAGCAGGGCAAGAGCGACGGCGAGATCGTCGACTACATGGTTGCCCGCTACGGTGACTTCGTTCGCTACAAG
CCGCCGGTCAACGAGCGTACCTGGCTGCTCTGGTTCGGTCCGGGCGCCTTGCTGCTGTTCGGCGTGCTGGTG
ATCGGCGTGATCGTCCTGCGCCGCCGGCGCACCGCCGCCAAGGTGCAAACCACCCTGTCCGCCGAGGAGCAA
GCGCGCCTCGCCAACCTGTTGAAGAACGACAAATGA
Translation:
MKRFLATALLGIALCGVARAAIDTYEFASDAERERFRNLTQELRCPKCQNQDIADSNAPIAADLRKQIYGQL
QQGKSDGEIVDYMVARYGDFVRYKPPVNERTWLLWFGPGALLLFGVLVIGVIVLRRRRTAAKVQTTLSAEEQ
ARLANLLKNDK*
AnnotationID:4461 GeneID:4455
Modification Date/Time:
2005-02-24 17:05:22
GeneProduct: cytochrome C-type biogenesis protein CcmH
Cell Localization Confidence Code: 5
Functional Category: (12) Energy metabolism
Alternate Gene Product Name: cytochrome c-type biogenesis protein CycL
Functional Category Confidence Code: 5
Secondary Functional Category(ies): central intermediary metabolism
Homology: >gb|AAO57099.1| (AE016869) cytochrome c-type biogenesis protein CycL [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 156
Score = 201 bits (512), Expect = 9e-52
Identities = 99/155 (63%), Positives = 118/155 (76%)
>emb|CAA88020.1| (Z47979) periplasmic or inner membrane associated protein
[Pseudomonas fluorescens]
Length = 149
Score = 170 bits (430), Expect = 3e-42
Identities = 85/129 (65%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
>gb|AAM85143.1| AE013760_8 (AE013760) putative cytochrome c-type biogenesis protein [Yersinia
pestis KIM]
Length = 170
Score = 144 bits (364), Expect = 1e-34
Identities = 77/147 (52%), Positives = 101/147 (68%), Gaps = 4/147 (2%)
Structural Features: COG3088 , CcmH, Uncharacterized protein involved in biosynthesis
of c-type cytochromes
[Posttranslational modification, protein turnover, chaperones]
CD-Length = 153 residues, 98.7% aligned
Score = 198 bits (505), Expect = 2e-52
Identities = 86/154 (55%), Positives = 104/154 (67%), Gaps = 3/154 (1%)
pfam03918 , CcmH, Cytochrome C biogenesis protein.
CD-Length = 149 residues, 98.7% aligned
Score = 173 bits (439), Expect = 9e-45
Identities = 75/148 (50%), Positives = 98/148 (66%), Gaps = 1/148 (0%)