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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08512.1|AE004926_2 (AE004926) probable rRNA methylase [Pseudomonas aeruginosa PAO1]
Identities = 151/153 (98%), Positives = 151/153 (98%)
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Sequence:
ATGTTCCACGTCATCCTGTTTCAACCGGAGATTCCTCCGAATACCGGCAACATTATCAGGCTCTGCGCCAAC
GCCGGATGCAGTCTGCACCTGATCGAGCCGCTCGGTTTCGAACTGGACGACAAGCGCTTGCGCCGTGCCGGC
CTCGACTACCACGAATACGCCAGCGTACGCCGCTACCCGGATCTGCAGAGCTGCCTCGAGGCCCTCGGCCAG
TCACGCCTATTCGCCTTCACCACCAAGGGGTCGCGGGCCTTCCACGAAGTGGCCTACCAGCGCGGCGATGCC
TTCCTCTTCGGCCCGGAAAGCCGCGGACTGCCGGAGGACGTGCGCAACGCCCTGCCAACCGATCGGCGCCTG
CGCCTGCCGATGCGCGAAGGCTGCCGTAGCCTGAACCTGTCCAACACGGTGGCGGTGACCGTCTACGAAGCC
TGGCGCCAGCTCGGCTTCGCCATGGACTGA |
Translation:
MFHVILFQPEIPPNTGNIIRLCANAGCSLHLIEPLGFELDDKRLRRAGLDYHEYASVRRYPDLQSCLEALGQ
SRLFAFTTKGSRAFHEVAYQRGDAFLFGPESRGLPEDVRNALPTDRRLRLPMREGCRSLNLSNTVAVTVYEA
WRQLGFAMD* |
AnnotationID:4451 | GeneID:4445 |
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Modification Date/Time: |
2005-03-15 09:09:42 |
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GeneProduct: | putative RNA methylase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | putative tRNA/rRNA methyltransferase |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | translation, ribosomal structure and biogenesis |
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Homology: | >gb|AAN70617.1|AE016704_8 (AE016793) RNA methyltransferase, TrmH family, group 2 [Pseudomonas
putida KT2440]
Length = 157
Score = 258 bits (659), Expect = 8e-69
Identities = 122/151 (80%), Positives = 135/151 (89%)
>emb|CAC79245.1| (AJ320536) putative RNA methylase [Pseudomonas stutzeri]
Length = 160
Score = 248 bits (634), Expect = 6e-66
Identities = 121/160 (75%), Positives = 134/160 (83%), Gaps = 7/160 (4%)
>emb|CAB85429.1| (AL162758) putative tRNA/rRNA methyltransferase [Neisseria
meningitidis Z2491]
Length = 154
Score = 201 bits (511), Expect = 1e-51
Identities = 91/151 (60%), Positives = 119/151 (78%) |
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Structural Features: | COG0219, CspR, Predicted rRNA methylase (SpoU class)
[Translation, ribosomal structure and biogenesis]
CD-Length = 155 residues, 98.7% aligned
Score = 235 bits (600), Expect = 3e-63
Identities = 99/154 (64%), Positives = 121/154 (78%), Gaps = 2/154 (1%)
pfam00588, SpoU_methylase, SpoU rRNA Methylase family.
CD-Length = 143 residues, 100.0% aligned
Score = 127 bits (321), Expect = 5e-31
Identities = 57/145 (39%), Positives = 74/145 (51%), Gaps = 5/145 (3%) |
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Comment: | other possible gene name: yibK |
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