ViewGene
Locus Name:
GeneID:
Location:

GeneID:4439
TrivialName: PA14_13230
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_13230
PAO1 Ortholog Locus:PA3918
Sequence Length:483
Protein Length:160
Start: 1138820
Stop: 1139302
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG07305.1|AE004809_5 (AE004809) molybdopterin biosynthetic protein C [Pseudomonas aeruginosa PAO1]
Identities = 160/160 (100%), Positives = 160/160 (100%)
Sequence:
GTGCTGACCCATCTCGATTCCCAGGGCCGCGCCAACATGGTCGACGTCACGGAAAAGGCCGTGACCTCCCGT
GAAGCCACGGCCGAGGCCGTGGTGCGCATGCGCCCGGAAACCCTGCAACTGATCCAGGACGGCGGCCATCCC
AAGGGCGACGTCTTCGCCGTGGCGCGGATCGCCGGCATCCAGGCGGCCAAGCGCACCCACGAACTGATCCCG
CTGTGCCATCCGCTGCTGCTCACCAGCGTCAAGCTCGAACTGCAGGCCGAGGCGCCGGACGCCGTGCGCATC
CGCGCGCGTTGCCGGCTGGCCGGGCAGACCGGCGTGGAGATGGAGGCGCTCACCGCCGCCAGCGTCGCGGCC
CTGACCATCTACGACATGTGCAAGGCGGTGGACCGCGGGATGGTCATCGAGCAGGTCCAGTTGCTGGAGAAG
CTCGGCGGCAAGAGCGGCCACTACCGCAAAGAGGAGGAAGGGCAGGCATGA
Translation:
MLTHLDSQGRANMVDVTEKAVTSREATAEAVVRMRPETLQLIQDGGHPKGDVFAVARIAGIQAAKRTHELIP
LCHPLLLTSVKLELQAEAPDAVRIRARCRLAGQTGVEMEALTAASVAALTIYDMCKAVDRGMVIEQVQLLEK
LGGKSGHYRKEEEGQA*
AnnotationID:4445GeneID:4439
AnnotatorUID: urbach
Modification Date/Time: 2004-03-16 00:12:36
Gene Name:moaC
Confidence Code:2
GeneProduct:probable Molybdenum cofactor biosynthesis protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(4) Biosynthesis of cofactors, prosthetic groups and carriers
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0315,pfam01967,KOG2876
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
64.41% identity Molybdenum cofactor biosynthesis protein C (moaC)[Escherichia coli CFT073]






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:15086




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:17126




  
Author/Investigator(s):
        Santamaria-Araujo JA, Fischer B, Otte T, Nimtz M, Mendel RR, Wray V, Schwarz G.





  
Title:
        The tetrahydropyranopterin structure of the sulfur- and metal-free molybdenum cofactor precursor.




  
PubMed:
        14761975


MedLine:
        




    
Source:
J Biol Chem. 2004 Feb 3 [Epub ahead of print]






    
Reference Type:Online 







    
Data:


    		




 
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=14761975

















    ReferenceID:17127




  
Author/Investigator(s):
        





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:Misc (text/plain)







    
Data:4439_CDD.html


    		




 
URL:

















    ReferenceID:26022




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:4439
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
6782
                           PA3918_tr
                           translation of PA3918
                           160
                           99.99
                           99.99
                           0
                           796.0
     

     
     
181484
                           gb|AAG07305.1|AE004809_5
                           (AE004809) molybdopterin biosynthetic protein C [Pseudomonas aeruginosa PAO1]
                           160
                           99.37
                           99.99
                           0
                           793.0
     

     
     
181485
                           gb|AAN66916.1|AE016320_4
                           (AE016778) molybdenum cofactor biosynthesis protein C [Pseudomonas putida KT2440]
                           160
                           83.12
                           90.00
                           4
                           664.0
     

     
     
181486
                           gb|AAO54772.1|
                           (AE016860) molybdenum cofactor biosynthesis protein C [Pseudomonas syringae pv. tomato str. DC3000]
                           161
                           77.63
                           88.19
                           1
                           632.0
     

     
     
181487
                           dbj|BAC60357.1|
                           (AP005080) molybdenum cofactor biosynthesis protein C [Vibrio parahaemolyticus]
                           163
                           66.87
                           78.52
                           7
                           530.0
     

     






      

          
GC ORFID: 47441How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA3918Glimmer Score: 

          
Start: 3815118Stop: 3814636

          
Length: 483


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA3918 translation of PA3918Homolog Bit Score 311.0

          
Other Homologs:  psyr_15may02_Scaffold3_revised_gene4384 (ORF: BLASTX 252.0), t_PA3918 (ORF: GLIMMER)

          
GC ORF Sequence

           
GTGCTGACCCATCTCGATTCCCAGGGCCGCGCCAACATGGTCGACGTCACGGAAAAGGCCGTGACCTCCCGT 
GAAGCCACGGCCGAGGCCGTGGTGCGCATGCGCCCGGAAACCCTGCAACTGATCCAGGACGGCGGCCATCCC 
AAGGGCGACGTCTTCGCCGTGGCGCGGATCGCCGGCATCCAGGCGGCCAAGCGCACCCACGAACTGATCCCG 
CTGTGCCATCCGCTGCTGCTCACCAGCGTCAAGCTCGAACTGCAGGCCGAGGCGCCGGACGCCGTGCGCATC 
CGCGCGCGTTGCCGGCTGGCCGGGCAGACCGGCGTGGAGATGGAGGCGCTCACCGCCGCCAGCGTCGCGGCC 
CTGACCATCTACGACATGTGCAAGGCGGTGGACCGCGGGATGGTCATCGAGCAGGTCCAGTTGCTGGAGAAG 
CTCGGCGGCAAGAGCGGCCACTACCGCAAAGAGGAGGAAGGGCAGGCATGA