ViewGene

Locus Name:
GeneID:
Location:

GeneID:4434
TrivialName: PA14_52490
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_52490
PAO1 Ortholog Locus:PA0910
Sequence Length:504
Protein Length:167
Start: 4657447
Stop: 4656944
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04299.1|AE004525_7 (AE004525) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 160/167 (95%), Positives = 163/167 (97%)
Sequence:
ATGTCCAGTGCAACCGTGCGCCTGGATCACGCCGCCCTGCGCGAAACGTTGCGGCAGTTGTTCGGCCTGCCC
GCCGGCAGCGTCGTCGATGCCGATCAACTGCTGGCCCCGCCGGCCATCCCCTTCATGACCTTGCGCCTGGAG
TCCTCGAGCCTGCTTGGCAAGGTGCGGCGGGAGTTTTCCGCCAGTGGCGAGCAGGAGTCCCTGCTGGCCAGT
TGCGAGAGCATCTTTCGCCTGACCTGGCATGGTCCCGGGGCGCACCAGTACCTGCAGGATGCCCGCTGCCTG
CTGCAGTCAGGCAATGCCGGCGAGCGCCTGCGCCTGCTGAAGGCCAGCCTGCTGCGCCTGACGCCCATCGAA
AACCTGTCCGTCGTGCAGGATGGCCAGGCGCTGGGGCAGGCTCGTTTCGACCTTGTTCTCGCTCACGAACAC
GTGCTGCTCGTCGACCTCGAGCGCACCGCTTCCGGACAGGCCTCCGGGGGGACGGGTGGAACGGCTGCCTAG
Translation:
MSSATVRLDHAALRETLRQLFGLPAGSVVDADQLLAPPAIPFMTLRLESSSLLGKVRREFSASGEQESLLAS
CESIFRLTWHGPGAHQYLQDARCLLQSGNAGERLRLLKASLLRLTPIENLSVVQDGQALGQARFDLVLAHEH
VLLVDLERTASGQASGGTGGTAA*
AnnotationID:4440GeneID:4434
AnnotatorUID: danlee
Modification Date/Time: 2004-05-06 13:01:08
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA0910
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:8869
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:26012
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:4434

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
6775 PA0910_tr translation of PA0910 167 95.80 97.60 0 798.0
181396 gb|AAG04299.1|AE004525_7 (AE004525) hypothetical protein PA0910 [Pseudomonas aeruginosa PAO1] 167 95.80 97.60 0 798.0
GC ORFID: 47436How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0910Glimmer Score:
Start: 296460Stop: 296963
Length: 504
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: t_PA0910 translation of PA0910Homolog Bit Score 311.0
Other Homologs: t_PA0910 (ORF: GLIMMER)
GC ORF Sequence
ATGTCCAGTGCAACCGTGCGCCTGGATCACGCCGCCCTGCGCGAAACGTTGCGGCAGTTGTTCGGCCTGCCC
GCCGGCAGCGTCGTCGATGCCGATCAACTGCTGGCCCCGCCGGCCATCCCCTTCATGACCTTGCGCCTGGAG
TCCTCGAGCCTGCTTGGCAAGGTGCGGCGGGAGTTTTCCGCCAGTGGCGAGCAGGAGTCCCTGCTGGCCAGT
TGCGAGAGCATCTTTCGCCTGACCTGGCATGGTCCCGGGGCGCACCAGTACCTGCAGGATGCCCGCTGCCTG
CTGCAGTCAGGCAATGCCGGCGAGCGCCTGCGCCTGCTGAAGGCCAGCCTGCTGCGCCTGACGCCCATCGAA
AACCTGTCCGTCGTGCAGGATGGCCAGGCGCTGGGGCAGGCTCGTTTCGACCTTGTTCTCGCTCACGAACAC
GTGCTGCTCGTCGACCTCGAGCGCACCGCTTCCGGACAGGCCTCCGGGGGGACGGGTGGAACGGCTGCCTAG