Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG05204.1| AE004608_3 (AE004608) ribonuclease H [Pseudomonas aeruginosa PAO1]
Identities = 148/148 (100%), Positives = 148/148 (100%)
Sequence:
ATGACAGATAAAGAACAGGTAGTGATCTATACCGACGGCGCCTGCAAGGGCAACCCTGGGCGCGGCGGCTGG
GGGGCGTTGCTCCTCTACAAGGGCGCCGAGCGAGAGCTTTGGGGCGGCGAGCCGGACACCACCAACAACCGC
ATGGAGCTGATGGCGGCGATCCAGGCGCTGGCGGCACTCAAGCGTTCCTGTCCGATCCGTCTGATCACCGAC
TCGGAATACGTGATGCGCGGCATCACCGAATGGTTGCCGAACTGGAAGAAGCGCGGCTGGAAGACCGCCAGC
AAGCAGCCTGTCAAGAATGCCGACCTCTGGCAGGCCCTGGATGAACAGGTCGCCCGGCACCAGGTGGAGTGG
CAGTGGGTCCGCGGGCATACCGGCGACCCCGGCAACGAGCGGGCCGACCAGTTGGCCAACCGTGGCGTCGCC
GAATTGCCGCGCTGA
Translation:
MTDKEQVVIYTDGACKGNPGRGGWGALLLYKGAERELWGGEPDTTNNRMELMAAIQALAALKRSCPIRLITD
SEYVMRGITEWLPNWKKRGWKTASKQPVKNADLWQALDEQVARHQVEWQWVRGHTGDPGNERADQLANRGVA
ELPR*
AnnotationID:4415 GeneID:4409
Modification Date/Time:
2005-04-28 13:01:20
GeneProduct: ribonuclease H
Cell Localization Confidence Code: 5
Functional Category: (11) DNA replication, recombination, modification and repair
Alternate Gene Product Name: ribonuclease HI
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: >gb|AAN69724.1| AE016608_10 (AE016789) ribonuclease HI [Pseudomonas putida KT2440]
Length = 148
Score = 238 bits (606), Expect = 1e-62
Identities = 105/142 (73%), Positives = 122/142 (85%)
>gb|AAO57181.1| (AE016869) ribonuclease HI [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 150
Score = 237 bits (604), Expect = 2e-62
Identities = 105/142 (73%), Positives = 122/142 (85%)
>emb|CAE34642.1| (BX640450) ribonuclease HI [Bordetella bronchiseptica]
Length = 155
Score = 216 bits (550), Expect = 3e-56
Identities = 96/141 (68%), Positives = 115/141 (81%)
Structural Features: COG0328 , RnhA, Ribonuclease HI [DNA replication, recombination, and repair]
CD-Length = 154 residues, 91.6% aligned
Score = 185 bits (471), Expect = 2e-48
Identities = 86/141 (60%), Positives = 101/141 (71%), Gaps = 3/141 (2%)
pfam00075 , RnaseH, RNase H.
CD-Length = 126 residues, 98.4% aligned
Score = 125 bits (315), Expect = 3e-30
Identities = 61/139 (43%), Positives = 80/139 (57%), Gaps = 15/139 (10%)