ViewGene

Locus Name:
GeneID:
Location:

GeneID:4388
TrivialName: PA14_15050
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_15050
PAO1 Ortholog Locus:PA3791
Sequence Length:462
Protein Length:153
Start: 1276025
Stop: 1276486
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG07178.1|AE004798_1 (AE004798) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 153/153 (100%), Positives = 153/153 (100%)
Sequence:
GTGGCGACCACTCTGAAACGACAAGGCATCGGTGCATGGCTGGCTCTGTTCGCCATGCTGATGATCTTCGTC
GGGCCGTTGATCTCCCAGTCGATGCCGATGGACCACCCGATGCCGATGGGCGTGGGGATGGGCCACGAAGGC
ATGTCCCACGAGAACATGGACCATGGCGACATGGCCCATGCCGGCTGTTCCGATGCCCAGCGCTCCGTCGTC
CATGCCGGCATGCCGGGGATGGGCGGCGAGGAAGGCAATCGCCTGGCCAGCGACGTGCTCTGGGAGAAGTGC
GGTTATTGCAGCCTGTTGTTCCACAGCCCGCCGCTCACCGAAGACGCCTGCCTGGCGCTGTTCTCCGTTCCC
TTCGCGACGGCGCCCGCCGTCGCTTTCCTGAACGAGGCGTTCGTCGCCTCGCCGGTGTTTCCCGGCGCCCGT
ACCCGTGCGCCGCCGTTCCTGATCGccTGA
Translation:
MATTLKRQGIGAWLALFAMLMIFVGPLISQSMPMDHPMPMGVGMGHEGMSHENMDHGDMAHAGCSDAQRSVV
HAGMPGMGGEEGNRLASDVLWEKCGYCSLLFHSPPLTEDACLALFSVPFATAPAVAFLNEAFVASPVFPGAR
TRAPPFLIA*
AnnotationID:4394GeneID:4388
AnnotatorUID: diggins
Modification Date/Time: 2005-04-24 10:10:03
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:PA3791
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15074
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:25920
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:4388

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
6724 PA3791_tr translation of PA3791 153 99.99 99.99 0 818.0
180650 gb|AAG07178.1|AE004798_1 (AE004798) hypothetical protein PA3791 [Pseudomonas aeruginosa PAO1] 153 99.34 99.99 0 815.0
GC ORFID: 47390How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA3791Glimmer Score:
Start: 3677912Stop: 3677451
Length: 462
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA3791 translation of PA3791Homolog Bit Score 319.0
Other Homologs: t_PA3791 (ORF: GLIMMER)
GC ORF Sequence
GTGGCGACCACTCTGAAACGACAAGGCATCGGTGCATGGCTGGCTCTGTTCGCCATGCTGATGATCTTCGTC
GGGCCGTTGATCTCCCAGTCGATGCCGATGGACCACCCGATGCCGATGGGCGTGGGGATGGGCCACGAAGGC
ATGTCCCACGAGAACATGGACCATGGCGACATGGCCCATGCCGGCTGTTCCGATGCCCAGCGCTCCGTCGTC
CATGCCGGCATGCCGGGGATGGGCGGCGAGGAAGGCAATCGCCTGGCCAGCGACGTGCTCTGGGAGAAGTGC
GGTTATTGCAGCCTGTTGTTCCACAGCCCGCCGCTCACCGAAGACGCCTGCCTGGCGCTGTTCTCCGTTCCC
TTCGCGACGGCGCCCGCCGTCGCTTTCCTGAACGAGGCGTTCGTCGCCTCGCCGGTGTTTCCCGGCGCCCGT
ACCCGTGCGCCGCCGTTCCTGATCGccTGA