ViewGene

Locus Name:
GeneID:
Location:

GeneID:4385
TrivialName: PA14_07380
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_07380
PAO1 Ortholog Locus:PA0568
Sequence Length:459
Protein Length:152
Start: 633327
Stop: 632869
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG03957.1|AE004493_2 (AE004493) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 151/152 (99%), Positives = 152/152 (100%)
Sequence:
ATGGAACTGATCCGCAACCTGGACGATGCGAACATGGGCGAAGTGTATTGGCGCCTGTACCGGCGCTACATC
AGCCTGTTCATCGAGAACGAGGCCGACGACGCCTACGCCTGGCGCTGCGCCCGAGCCCTCGACGAACTGGAT
GACGCCGTGGTCGAGCGGCTTTGTGCCGCCAGCCTGCGCTACCGCGCCGCGCGCCTGGAGCGGCTGGGCGAG
TCTGCGGAGGAAGTCGCGCCGGCGCGCGGGGTGCTGGAACGGATCGAACCGGGCGAGCTGATCGTGCCCGAC
CCGGAACAGGGCGACGAAGCGGTGATCCACCTGTCGCTGAACTGCGAATGGGACCGCGAACACGGTATGGAA
TGGATCGTCCGGGGCGGCGAGGTGCTCTATGTCGGCCCCTTCCACGGCGAAGACCCGTGGCGGGACTTCACC
GTGAAGGAACCATGGAACTACGCCTGA
Translation:
MELIRNLDDANMGEVYWRLYRRYISLFIENEADDAYAWRCARALDELDDAVVERLCAASLRYRAARLERLGE
SAEEVAPARGVLERIEPGELIVPDPEQGDEAVIHLSLNCEWDREHGMEWIVRGGEVLYVGPFHGEDPWRDFT
VKEPWNYA*
AnnotationID:4391GeneID:4385
AnnotatorUID: diggins
Modification Date/Time: 2005-03-29 08:08:14
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA0568
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:8771
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:25914
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:4385

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
6721 PA0568_tr translation of PA0568 152 99.34 99.99 0 821.0
180647 gb|AAG03957.1|AE004493_2 (AE004493) hypothetical protein PA0568 [Pseudomonas aeruginosa PAO1] 152 99.34 99.99 0 821.0
GC ORFID: 47387How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0568Glimmer Score:
Start: 6434670Stop: 6434212
Length: 459
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA0568 translation of PA0568Homolog Bit Score 320.0
Other Homologs: t_PA0568 (ORF: GLIMMER)
GC ORF Sequence
ATGGAACTGATCCGCAACCTGGACGATGCGAACATGGGCGAAGTGTATTGGCGCCTGTACCGGCGCTACATC
AGCCTGTTCATCGAGAACGAGGCCGACGACGCCTACGCCTGGCGCTGCGCCCGAGCCCTCGACGAACTGGAT
GACGCCGTGGTCGAGCGGCTTTGTGCCGCCAGCCTGCGCTACCGCGCCGCGCGCCTGGAGCGGCTGGGCGAG
TCTGCGGAGGAAGTCGCGCCGGCGCGCGGGGTGCTGGAACGGATCGAACCGGGCGAGCTGATCGTGCCCGAC
CCGGAACAGGGCGACGAAGCGGTGATCCACCTGTCGCTGAACTGCGAATGGGACCGCGAACACGGTATGGAA
TGGATCGTCCGGGGCGGCGAGGTGCTCTATGTCGGCCCCTTCCACGGCGAAGACCCGTGGCGGGACTTCACC
GTGAAGGAACCATGGAACTACGCCTGA