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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08513.1|AE004926_3 (AE004926) secretion protein SecB [Pseudomonas aeruginosa PAO1]
Identities = 163/163 (100%), Positives = 163/163 (100%)
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Sequence:
ATGACCGAGCAAGCTACCAACGGCGCTGCCGACGAGCAGCAACCCCAGTTCTCCCTGCAGCGCATCTACCTG
CGCGACCTGTCGTTCGAGTCGCCGAAGTCCCCGGAAATCTTCCGCCAGGAATGGAACCCGTCCATCAGCCTG
GACCTGAACACTCGCCAGAAGCAGCTGGACGGCGACTTCTACGAAGTGGTCCTGACCGTATCGGTGACCGTG
AAGAACGGCGAGGACACCACTGCCTTCATCGCCGAAGTGCAGCAGGCCGGCATCTTCCTGATCAAGAACCTC
GATCCGTCGAGCATGAGCCATACCCTCGGCGCGTTCTGCCCGAACATCCTCTTCCCGTACGCTCGCGAAGCC
CTGGACAACCTGGTGGTACGCGGTTCGTTCCCGGCGCTGATGCTGTCGCCGGTGAACTTCGACGCCCTCTAC
GCCCAGGAAATCGCCCGCATGCAGGCCTCCGGCGAGATCCCGACGCCGTCGGTCCAGTAA |
Translation:
MTEQATNGAADEQQPQFSLQRIYLRDLSFESPKSPEIFRQEWNPSISLDLNTRQKQLDGDFYEVVLTVSVTV
KNGEDTTAFIAEVQQAGIFLIKNLDPSSMSHTLGAFCPNILFPYAREALDNLVVRGSFPALMLSPVNFDALY
AQEIARMQASGEIPTPSVQ* |
AnnotationID:4365 | GeneID:4359 |
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Modification Date/Time: |
2005-03-15 12:12:48 |
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GeneProduct: | secretion protein SecB |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (19) Protein secretion/export apparatus |
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Alternate Gene Product Name: | preprotein translocase subunit SecB |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO58750.1| (AE016875) protein-export protein SecB [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 164
Score = 258 bits (659), Expect = 1e-68
Identities = 129/165 (78%), Positives = 145/165 (87%), Gaps = 3/165 (1%)
>gb|AAN70618.1|AE016704_9 (AE016793) protein-transport protein SecB [Pseudomonas putida
KT2440]
Length = 161
Score = 254 bits (650), Expect = 1e-67
Identities = 128/160 (80%), Positives = 143/160 (89%), Gaps = 2/160 (1%)
>gb|AAN53139.1|AE015457_1 (AE015457) protein-export protein SecB [Shewanella oneidensis MR-1]
Length = 157
Score = 180 bits (456), Expect = 3e-45
Identities = 87/154 (56%), Positives = 119/154 (77%), Gaps = 4/154 (2%)
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Structural Features: | COG1952, SecB, Preprotein translocase subunit SecB
[Intracellular trafficking and secretion]
CD-Length = 157 residues, 94.9% aligned
Score = 200 bits (510), Expect = 6e-53
Identities = 85/150 (56%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
cd00557, Translocase_SecB, Preprotein translocase subunit SecB.
CD-Length = 131 residues, 100.0% aligned
Score = 139 bits (351), Expect = 2e-34
Identities = 59/131 (45%), Positives = 88/131 (67%), Gaps = 1/131 (0%) |
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