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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07634.1|AE004841_12 (AE004841) 30S ribosomal protein S5 [Pseudomonas aeruginosa PAO1]
Identities = 166/166 (100%), Positives = 166/166 (100%)
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Sequence:
ATGGCAAACAACGAGCAAAAGCGCGACGAAGGCTACATCGAGAAGCTGGTTCAGGTTAACCGCGTCGCCAAA
ACCGTAAAAGGTGGCCGTATCTTCGCTTTCACCGCACTGACCGTGGTGGGTGATGGCAAGGGTCGCGTTGGT
TTCGGTCGTGGCAAGGCGCGTGAAGTGCCGGCCGCCATCCAGAAAGCAATGGAAGCCGCTCGCCGCAACATG
ATCCAAGTCGATCTGAACGGCACCACCCTGCAGTATCCGACCAAGTCCGCCCATGGCGCCTCCAAGGTGTAC
ATGCAGCCGGCTTCGGAAGGTACCGGCATCATCGCCGGCGGCGCCATGCGTGCCGTTCTGGAAGTGGCTGGT
GTGCAGAACGTCCTGGCCAAGTGCTATGGCTCCACCAATCCGGTGAACGTGGTTTACGCCACCTTCAAGGGC
CTGAAGAACATGCAGGCTCCGGAAGCAGTAGCGGCCAAGCGTGGCAAGAGCGTCGAGGAGATTCTCTAA |
Translation:
MANNEQKRDEGYIEKLVQVNRVAKTVKGGRIFAFTALTVVGDGKGRVGFGRGKAREVPAAIQKAMEAARRNM
IQVDLNGTTLQYPTKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKG
LKNMQAPEAVAAKRGKSVEEIL* |
AnnotationID:4357 | GeneID:4351 |
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Modification Date/Time: |
2005-04-02 22:10:53 |
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GeneProduct: | 30S ribosomal protein S5 |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | translation, ribosomal structure and biogenesis |
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Homology: | >gb|AAN66101.1|AE016238_19 (AE016775) ribosomal protein S5 [Pseudomonas putida KT2440]
Length = 166
Score = 306 bits (784), Expect = 3e-83
Identities = 155/165 (93%), Positives = 161/165 (97%)
>gb|AAO54185.1| (AE016858) ribosomal protein S5 [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 166
Score = 302 bits (773), Expect = 6e-82
Identities = 152/166 (91%), Positives = 161/166 (96%)
>gb|AAP19378.1| (AE016992) 30S ribosomal subunit protein S5 [Shigella flexneri 2a
str. 2457T]
Length = 167
Score = 241 bits (616), Expect = 1e-63
Identities = 128/166 (77%), Positives = 140/166 (84%), Gaps = 1/166 (0%) |
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Structural Features: | COG0098, RpsE, Ribosomal protein S5 [Translation, ribosomal structure and biogenesis]
CD-Length = 181 residues, 90.1% aligned
Score = 206 bits (527), Expect = 8e-55
Identities = 97/163 (59%), Positives = 125/163 (76%), Gaps = 1/163 (0%)
pfam03719, Ribosomal_S5_C, Ribosomal protein S5, C-terminal domain.
CD-Length = 74 residues, 100.0% aligned
Score = 86.5 bits (214), Expect = 1e-18
Identities = 37/74 (50%), Positives = 50/74 (67%)
pfam00333, Ribosomal_S5, Ribosomal protein S5, N-terminal domain.
CD-Length = 67 residues, 95.5% aligned
Score = 81.0 bits (200), Expect = 6e-17
Identities = 36/64 (56%), Positives = 48/64 (75%) |
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