ViewGene

Locus Name:
GeneID:
Location:

GeneID: 424

TrivialName: PA14_50590

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_50590

PAO1 Ortholog Locus: PA1068

Sequence Length: 1911

Protein Length: 636

Start: 4496291

Stop: 4494381

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG04457.1|AE004538_9 (AE004538) probable heat shock protein (hsp90 family) [Pseudomonas aeruginosa PAO1] Identities = 633/636 (99%), Positives = 633/636 (99%)

Sequence:

GTGGCAGAATCCCGCACCGGACCGCTCGCGTGCGAGCGGACGCCATTCATCGAACGCTTGGATAGGGACATG
CAAAGCAGCTTTCCGCAATCGAACACTCCCCAGATCCGTCGCGCTGGAGTTGACCTCAACGGCGTGATGTCG
GTGCTCAGCAAGCACCTCTATTCCACGCCCACCGTGGCGTTGCGCGAGCTGGTGCAGAACGCCCACGACTCG
ATCCTCCGTCGCCGCCTGGAGCAGCCCGACTGGCAAGGGCCGTCGCGAATCGAGGTGATCGGCGACAGCGCC
AGCAACACCGTGCGCATCGTCGACACCGGCGCCGGGCTCACCGAACACGAAATCCACGCCTACCTGGCCACC
GTCGGCGTCGGCTACACCCGTGGACTGCGCCAGTCCGGCCACGAGGACAGCGGGCTGATCGGCATGTTCGGC
CTGGGCTTCCTCTCCGCTTTCGTCCTGGCCCGCCGGGTCAGCGTGCGGACCACGTCCTACCAGCAGCCGGAG
CTGGGCTTCTGCTACGTCTCCAGCAACGCCGAGCAATACAGCGTGACGCCGATGCCGGCACGCCCGGTAGGC
ACCGAGATCACCCTCGAACTGCAGGACGAATACAGTGCGCTGACCCAGGCCGCGCGCCTGCGCGAGATCCTC
GAACGCTACTGCGTGCTGTTGCGCGAGCCGATCCACGTCGGCGGCGACGCCCAGCCGATCAACCCGGAGCCG
CCGCCGTGGCGGCTGGCCGCCGACGCCGCGCTGCACCCGCTGCAACGGCAGCGCCGCGACCTGGAGTTCGCC
GCGCGTTTCGAACATGACTTCGAACCGATCTGCTGCCTGCCGGTGCGCCCGGACGAGCGGGTCGACGTGCAG
GGTCTGCTGTGGATCCAGGACGGCGGCACCTATGGCACCAGCGACAACCGCAATCTCTCGGTTTTCCTCCGC
GGCATGCTGCTCGACGATGACGCCCGCGACCTGCTGCCGTCCTGGGCCGGGTTCGTCGGCGGGGTGATCGAG
TCGAACCGCCTGACGCCCACCGCCAGCCGCGAGGACCTGCAGCGCGACGACCATTACGCGGCGATCCAGCAT
GCGCTGGCCGAGGCGCTGATCGCCGGGCTCGGCGAGGTGGCGCGGCAGCAGCCGGAGGCCTGGCGGCGGGTC
CTGCTGCGGCACAACGAGGCCCTGCTGGGAGCGGCGTTGTGCGACGAGCGTCTGTTCGCGCTGATGATGGAC
AGCCTGCGCGTACCCACCTCCCAGGGCGACCTCCCGGCTTCCGAACTCCTTTCGCGCGGAGCGGTGCATGTG
CTGCTGGACAACGACAGCGGCTTCGAGGAAATGCTGTTCCGTGCCATGGGCGTACCGGTGGCCCATGGCAAT
CGCTATGCGGTGGTACCCTTCCTCCGTCGCTGGGCGCAGGCCAAGGGGATGCGCCTGGTGGAGCTGGGCACC
GAGCAGGGCAACCGCCAGTTGTTCCGCCTCGACCGACTGCCCGAGCGCGAGACCGGCTGGCTGGCCGAACAC
CTGGGCGGCGCCGAGGAGCAACTGGTGATCGCCCGCTTCAGCCCCGAGGAATTGCCGCTTGTGGTGGTGCCC
GACCGCGACGCCGAACTCAAGCGGCGACTGGAGGACGACGAGGCCGACAAGCGTATCTCCACCGCGGCGTTG
CGCCTGGCCCGGCAGTTCACCCGCAAGCTCGACAATCGCCAGCCGAGCCGGCTCTACGTCAACCTCGACAAT
CCGGCGGTGCAGGCGCTGCTCGCGGCCGTCGGCGAGGAACGCGACGAAGCGGCCCATGCGGCGTTGCTGCTG
CGCTCGTTCAAAGTGATCATCGCCGGACAGGGACGCGGCCAGCCCGCGACCTCGCTGAACCAGGCCCTGGCC
GGACTCGCCGATTCGGTGAAGCGCCTGCTGGGGCAATAA

Translation:

MAESRTGPLACERTPFIERLDRDMQSSFPQSNTPQIRRAGVDLNGVMSVLSKHLYSTPTVALRELVQNAHDS
ILRRRLEQPDWQGPSRIEVIGDSASNTVRIVDTGAGLTEHEIHAYLATVGVGYTRGLRQSGHEDSGLIGMFG
LGFLSAFVLARRVSVRTTSYQQPELGFCYVSSNAEQYSVTPMPARPVGTEITLELQDEYSALTQAARLREIL
ERYCVLLREPIHVGGDAQPINPEPPPWRLAADAALHPLQRQRRDLEFAARFEHDFEPICCLPVRPDERVDVQ
GLLWIQDGGTYGTSDNRNLSVFLRGMLLDDDARDLLPSWAGFVGGVIESNRLTPTASREDLQRDDHYAAIQH
ALAEALIAGLGEVARQQPEAWRRVLLRHNEALLGAALCDERLFALMMDSLRVPTSQGDLPASELLSRGAVHV
LLDNDSGFEEMLFRAMGVPVAHGNRYAVVPFLRRWAQAKGMRLVELGTEQGNRQLFRLDRLPERETGWLAEH
LGGAEEQLVIARFSPEELPLVVVPDRDAELKRRLEDDEADKRISTAALRLARQFTRKLDNRQPSRLYVNLDN
PAVQALLAAVGEERDEAAHAALLLRSFKVIIAGQGRGQPATSLNQALAGLADSVKRLLGQ*

AnnotationID:433 GeneID:424

AnnotatorUID: danlee

Modification Date/Time: 2004-05-19 16:04:40

Gene Name:

Confidence Code: 3

GeneProduct: probable heat shock protein (hsp90 family)

Cell Localization: ()

Synonyms: PA1068

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (9) Chaperones & heat shock proteins

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs: COG0326

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, 
protein turnover, chaperones]
       CD-Length = 623 residues,  99.8% aligned
       Score =  514 bits (1324), Expect = 2e-146

Genomic Context:

Comment:

ReferenceID:14135

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:17993

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

Homologs By Global Alignment

Gene ID:424

Identity:

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score

714 PA1068_tr translation of PA1068 636 99.52 99.52 0 3235.0

32226 gb|AAG04457.1|AE004538_9 (AE004538) probable heat shock protein (hsp90 family) [Pseudomonas aeruginosa PAO1] 636 99.37 99.52 0 3232.0

32227 gb|AAM36138.1| (AE011756) Hsp90xo protein [Xanthomonas axonopodis pv. citri str. 306] 646 71.05 80.03 34 2340.0

32228 gb|AAM40466.1| (AE012215) Hsp90xo protein [Xanthomonas campestris pv. campestris str. ATCC 33913] 672 68.45 76.78 50 2301.0

32229 gb|AAC95120.1| (AF022185) Hsp90xo [Xanthomonas oryzae pv. oryzae] 638 62.38 69.12 128 2069.0

GC ORFID: `43426`	How Found: `BLASTX`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name: `t_PA1068`	Glimmer Score:
Start: `457617`	Stop: `459527`
Length: `1911`
Start Codon: `GTG`	Truncated Start:
Stop Codon: `TAA`	Truncated Stop:
Homolog: `t_PA1068 translation of PA1068`	Homolog Bit Score `1250.0`
Other Homologs: `t_PA1068 (ORF: GLIMMER)`
GC ORF Sequence
GTGGCAGAATCCCGCACCGGACCGCTCGCGTGCGAGCGGACGCCATTCATCGAACGCTTGGATAGGGACATG CAAAGCAGCTTTCCGCAATCGAACACTCCCCAGATCCGTCGCGCTGGAGTTGACCTCAACGGCGTGATGTCG GTGCTCAGCAAGCACCTCTATTCCACGCCCACCGTGGCGTTGCGCGAGCTGGTGCAGAACGCCCACGACTCG ATCCTCCGTCGCCGCCTGGAGCAGCCCGACTGGCAAGGGCCGTCGCGAATCGAGGTGATCGGCGACAGCGCC AGCAACACCGTGCGCATCGTCGACACCGGCGCCGGGCTCACCGAACACGAAATCCACGCCTACCTGGCCACC GTCGGCGTCGGCTACACCCGTGGACTGCGCCAGTCCGGCCACGAGGACAGCGGGCTGATCGGCATGTTCGGC CTGGGCTTCCTCTCCGCTTTCGTCCTGGCCCGCCGGGTCAGCGTGCGGACCACGTCCTACCAGCAGCCGGAG CTGGGCTTCTGCTACGTCTCCAGCAACGCCGAGCAATACAGCGTGACGCCGATGCCGGCACGCCCGGTAGGC ACCGAGATCACCCTCGAACTGCAGGACGAATACAGTGCGCTGACCCAGGCCGCGCGCCTGCGCGAGATCCTC GAACGCTACTGCGTGCTGTTGCGCGAGCCGATCCACGTCGGCGGCGACGCCCAGCCGATCAACCCGGAGCCG CCGCCGTGGCGGCTGGCCGCCGACGCCGCGCTGCACCCGCTGCAACGGCAGCGCCGCGACCTGGAGTTCGCC GCGCGTTTCGAACATGACTTCGAACCGATCTGCTGCCTGCCGGTGCGCCCGGACGAGCGGGTCGACGTGCAG GGTCTGCTGTGGATCCAGGACGGCGGCACCTATGGCACCAGCGACAACCGCAATCTCTCGGTTTTCCTCCGC GGCATGCTGCTCGACGATGACGCCCGCGACCTGCTGCCGTCCTGGGCCGGGTTCGTCGGCGGGGTGATCGAG TCGAACCGCCTGACGCCCACCGCCAGCCGCGAGGACCTGCAGCGCGACGACCATTACGCGGCGATCCAGCAT GCGCTGGCCGAGGCGCTGATCGCCGGGCTCGGCGAGGTGGCGCGGCAGCAGCCGGAGGCCTGGCGGCGGGTC CTGCTGCGGCACAACGAGGCCCTGCTGGGAGCGGCGTTGTGCGACGAGCGTCTGTTCGCGCTGATGATGGAC AGCCTGCGCGTACCCACCTCCCAGGGCGACCTCCCGGCTTCCGAACTCCTTTCGCGCGGAGCGGTGCATGTG CTGCTGGACAACGACAGCGGCTTCGAGGAAATGCTGTTCCGTGCCATGGGCGTACCGGTGGCCCATGGCAAT CGCTATGCGGTGGTACCCTTCCTCCGTCGCTGGGCGCAGGCCAAGGGGATGCGCCTGGTGGAGCTGGGCACC GAGCAGGGCAACCGCCAGTTGTTCCGCCTCGACCGACTGCCCGAGCGCGAGACCGGCTGGCTGGCCGAACAC CTGGGCGGCGCCGAGGAGCAACTGGTGATCGCCCGCTTCAGCCCCGAGGAATTGCCGCTTGTGGTGGTGCCC GACCGCGACGCCGAACTCAAGCGGCGACTGGAGGACGACGAGGCCGACAAGCGTATCTCCACCGCGGCGTTG CGCCTGGCCCGGCAGTTCACCCGCAAGCTCGACAATCGCCAGCCGAGCCGGCTCTACGTCAACCTCGACAAT CCGGCGGTGCAGGCGCTGCTCGCGGCCGTCGGCGAGGAACGCGACGAAGCGGCCCATGCGGCGTTGCTGCTG CGCTCGTTCAAAGTGATCATCGCCGGACAGGGACGCGGCCAGCCCGCGACCTCGCTGAACCAGGCCCTGGCC GGACTCGCCGATTCGGTGAAGCGCCTGCTGGGGCAATAA