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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04578.1|AE004549_5 (AE004549) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 164/165 (99%), Positives = 165/165 (100%)
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Sequence:
ATGCCCGAACACCTCAACGCCCGCGTCGAGGCCTGCTATCGGCAGGCCGAACACTTCTTCCAACGCAGCTTC
CCCCGCCCGACCGTCAGCTTCCGCCTGCGCGGCCAGAAAGCCGGGGTCGCCCACCTCGACGAGAACCTGCTG
CGCTTCAATCCCCAGCTGTACCGCGAGAATCGCGAGCACTTCCTGGAACAGACCGTGGCCCACGAAGTCGCG
CACCTGATCGCGCACCAGTTGTTCGGCCCGCGCATCCGCCCCCACGGCGAGGAGTGGCAGTTGATCATGCGC
GGCATCTACGGCCTGCCGCCGGACCGCTGCCACACCTACGCGGTCAAGCGCCGCGCCACCACCCGCTACCTG
TACCGCTGCCATTGCCCGGAGCACAACGAGTTCCCGTTCTCCCCGCAACGCCACACCCTGGTGGCCAAGGGG
CGCCGCTACTACTGCCGGCGCTGCAAGGCGACCCTGGTGTTCACCGGCGAAGTGCTCCGCGAGTGA |
Translation:
MPEHLNARVEACYRQAEHFFQRSFPRPTVSFRLRGQKAGVAHLDENLLRFNPQLYRENREHFLEQTVAHEVA
HLIAHQLFGPRIRPHGEEWQLIMRGIYGLPPDRCHTYAVKRRATTRYLYRCHCPEHNEFPFSPQRHTLVAKG
RRYYCRRCKATLVFTGEVLRE* |
AnnotationID:4148 | GeneID:4141 |
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Modification Date/Time: |
2005-02-21 15:03:30 |
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GeneProduct: | putative peptidase, SprT family |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (24) Transcription, RNA processing and degradation |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | putative enzyme |
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Homology: | >gb|AAO55203.1| (AE016861) peptidase, SprT family [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 164
Score = 253 bits (647), Expect = 2e-67
Identities = 117/165 (70%), Positives = 138/165 (83%), Gaps = 1/165 (0%)
>gb|AAN67260.1|AE016352_13 (AE016780) sprT protein, putative [Pseudomonas putida KT2440]
Length = 164
Score = 253 bits (647), Expect = 2e-67
Identities = 117/161 (72%), Positives = 136/161 (84%), Gaps = 1/161 (0%)
>gb|AAC22826.1| (U32797) sprt protein (sprT) [Haemophilus influenzae Rd]
Length = 156
Score = 134 bits (337), Expect = 2e-31
Identities = 64/147 (43%), Positives = 93/147 (63%), Gaps = 5/147 (3%)
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Structural Features: | pfam03926, DUF335, Putative metallopeptidase (SprT family).
CD-Length = 149 residues, 100.0% aligned
Score = 178 bits (453), Expect = 6e-46
Identities = 73/153 (47%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
smart00731, SprT, SprT homologues.
Predicted to have roles in transcription elongation.
CD-Length = 146 residues, 99.3% aligned
Score = 111 bits (279), Expect = 8e-26
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 13/155 (8%) |
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