Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG08193.1| AE004893_11 (AE004893) selenocysteine-specific elongation factor [Pseudomonas aeruginosa PAO1]
Identities = 638/641 (99%), Positives = 639/641 (99%)
Sequence:
GTGATCGTCGGCACCGCCGGGCACATCGACCACGGCAAGACCTCGCTGCTGCGCGCCCTCACCGGCATCGAG
GGCGACCGCCGCCCGGCCGAGCGCCAACGCGGGATCACCATCGACCTGGGCTATCTCTACGCCGACCTTGGC
GACGGCAGCCCCACCGGCTTCATCGACGTGCCCGGTCACGAGCGCTTCGTCCACAACATGCTGGCCGGCGCC
AGCGGCATCGATTGCGTGCTGCTGGTGGTGGCCGCCGACGACGGCCTGATGCCGCAGACCCGCGAGCACCTG
GCGATCGTCGAACTGCTCGGTATCCGCCGGGCGCTGGTGGCGCTGACCAAGATCGACCGGGTCGAGCCGCAG
CGGGTGCAGCAGGTGCGGACCCAGGTCGAACACCTGCTGGCCTCCGGCCCGCTGGCGCGCTCGCCGATCTTC
CCGCTCTCCAGCAGCACCGGGGAGGGCGTCGCGGCGTTGCGCGAAGCACTCGGCGGGCTCGCCGGCGAAGTC
CGCGAGCGTAGCCGCGAGGGATACTTCCGCCTGGCGGTGGACCGGGCCTTCAGCGTCGCCGGCAGCGGCATC
GTGGTCACCGGCACGGCCTTCTCCGGACAGGTCGCGGTGGGCGACGAACTGCTCCTCGGCAACGCCGGACGG
CCGGTGCGGGTGCGCGGCCTGCACGCGCAGAACCGGCCCGCGCAACAGGCCTGGGCCGGCCAGCGCGTGGCC
CTGAACATCGCCGGCGAGCGCCTCGCGCTGGAACAGATCCAGCGCGGCGACTGGCTGCTGCAGGCAGCGCTG
CACGCGCCGACCACGCGGGTCGACATCGACTTCCGCCTGTTGCCCGACGAACTTCGCGACTTCACCCACTGG
ACCCCGGTGCACCTGCACCTGGGCACCCAGGACGTCACCGGGCGCCTGGCCCTGCTCGAAGGCGAACAACTG
GAGCCTGGCCACCGCGCCTTCGCCCAACTGGTGCTGAACGCGCCGATCCAGGCCCTGCACGGCGACCGCCTG
GTGCTGCGCGACCAGTCGGCGCAGCGCACCCTTGGCGGCGGGCGGGTGCTCGACGGCGCCGCGCCGGCGCGC
AACCGACGAACGCCGGCACGTCTGGCACAGCTCCAGGCGCTGCGCCAGGAAAGCCTGGAGGAGGCGCTGCCG
ACCTTGCTCGGCGCGGCCGAGAACGGCCTCGACCCGCAACGCCTGGTGCAATCCTTCAACCGCCCGCGCGAG
CACTGGCGGCTGCCGGAAGAGGTGGTCGAGGTGCAGACCCGCCTCGGCCCCCGGTTGTTCGCCGGGGAGCGC
TGGTTCGCCCTGGTCGAGCAACTGCTCGCCGGCCTGCGGCGCTTCCACGAAGAGCTACCGGACGAACTCGGT
CCCGACCGCGACCGCCTGCGTCGCTACGCCCTGCCGCAGCTGGAGCGGCCGGTGTTCATCGCCTTGCTCGAG
GCCGCCCTGGCCGGCGGCGACGTGCACAGCAGCGGGCCCTGGCTGCACCTGCCCGGCCATGAAGTGCGCCTG
AGCGATAGCGAGGAGCAACTGCGCGCGCGCCTCTGGCCGCTGCTCGAAGCCGGCCGCTACGACCCGCCCTGG
GTTCGCGACCTGGCCCGCGAGCTGCGCCAGGACGAAGCCGCCATGCGCAACCTGCTGCGCAAGCTGGCGCGC
CTGGGCCAGTTGCAGCAGGTGGTGCGCGACCTGTTCTACCCGGAAGCCACCCTGCGTCAATTGGCCGAGATC
GCCGTGCAGGTCCGCGACCCCGCCGGGCTGATCCGCCCGGCGGAATTCCGCGACCGCCTGGGCATCGGCCGC
AAGCGCAGCATCCAGATCCTCGAGCACTTCGACCGCATCGGCCTGACCCGCCGCATCGGCAACGACCGTCGC
CTGCGCGAGGGCTCGGCGCTGGCCGAACAGTTGCTCGGCGGCGTCTCGCCCTGA
Translation:
MIVGTAGHIDHGKTSLLRALTGIEGDRRPAERQRGITIDLGYLYADLGDGSPTGFIDVPGHERFVHNMLAGA
SGIDCVLLVVAADDGLMPQTREHLAIVELLGIRRALVALTKIDRVEPQRVQQVRTQVEHLLASGPLARSPIF
PLSSSTGEGVAALREALGGLAGEVRERSREGYFRLAVDRAFSVAGSGIVVTGTAFSGQVAVGDELLLGNAGR
PVRVRGLHAQNRPAQQAWAGQRVALNIAGERLALEQIQRGDWLLQAALHAPTTRVDIDFRLLPDELRDFTHW
TPVHLHLGTQDVTGRLALLEGEQLEPGHRAFAQLVLNAPIQALHGDRLVLRDQSAQRTLGGGRVLDGAAPAR
NRRTPARLAQLQALRQESLEEALPTLLGAAENGLDPQRLVQSFNRPREHWRLPEEVVEVQTRLGPRLFAGER
WFALVEQLLAGLRRFHEELPDELGPDRDRLRRYALPQLERPVFIALLEAALAGGDVHSSGPWLHLPGHEVRL
SDSEEQLRARLWPLLEAGRYDPPWVRDLARELRQDEAAMRNLLRKLARLGQLQQVVRDLFYPEATLRQLAEI
AVQVRDPAGLIRPAEFRDRLGIGRKRSIQILEHFDRIGLTRRIGNDRRLREGSALAEQLLGGVSP*
AnnotationID:423 GeneID:414
Modification Date/Time:
2005-03-11 06:06:38
GeneProduct: selenocysteine-specific elongation factor
Cell Localization Confidence Code: 5
Functional Category: (26) Translation, post-translational modification, degradation
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies): translation, ribosomal structure and biogenesis
Homology: >gb|AAN66123.1| AE016240_8 (AE016775) selenocysteine-specific translation elongation factor
[Pseudomonas putida KT2440]
Length = 640
Score = 783 bits (2022), Expect = 0.0
Identities = 411/636 (64%), Positives = 493/636 (77%), Gaps = 2/636 (0%)
Structural Features: COG3276 , SelB, Selenocysteine-specific translation elongation factor
[Translation, ribosomal structure and biogenesis]
CD-Length = 447 residues, 100.0% aligned
Score = 480 bits (1238), Expect = 2e-136
Identities = 218/470 (46%), Positives = 274/470 (58%), Gaps = 24/470 (5%)