Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG06131.1| AE004702_8 (AE004702) translation initiation factor IF-3 [Pseudomonas aeruginosa PAO1]
Identities = 177/177 (100%), Positives = 177/177 (100%)
Sequence:
ATGAGACAGGATAAGCGAGCTCAACCGAAACCCCCGATCAACGAGAACATCTCGGCTCGTGAGGTACGGTTG
ATTGGAGCTGATGGCCAGCAGGTTGGTGTTGTTTCGATCGATGAGGCGATCCGCCTAGCCGAAGAGGCGAAG
CTGGACCTGGTTGAGATTTCGGCCGACGCGGTGCCTCCTGTCTGCCGCATCATGGACTACGGCAAGCACCTG
TTCGAGAAGAAGAAGCAGGCTGCGGTCGCCAAGAAGAACCAGAAGCAGGCGCAGGTCAAAGAAATCAAGTTT
CGTCCAGGGACGGAAGAAGGGGATTACCAGGTAAAACTACGCAACCTGGTACGTTTCCTTAGTGAAGGGGAC
AAGGCCAAGGTATCCCTGCGATTCCGCGGCCGTGAGATGGCTCACCAGGAGCTGGGGATGGAGCTGTTGAAG
CGGGTCGAAGCCGACCTCGTGGAGTACGGCACCGTCGAGCAGCATCCTAAGCTGGAAGGACGCCAGCTGATG
ATGGTCATCGCTCCCAAGAAGAAAAAGTAA
Translation:
MRQDKRAQPKPPINENISAREVRLIGADGQQVGVVSIDEAIRLAEEAKLDLVEISADAVPPVCRIMDYGKHL
FEKKKQAAVAKKNQKQAQVKEIKFRPGTEEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLK
RVEADLVEYGTVEQHPKLEGRQLMMVIAPKKKK*
AnnotationID:4132 GeneID:4125
Modification Date/Time:
2005-04-05 08:08:31
GeneProduct: translation initiation factor IF-3
Cell Localization Confidence Code: 5
Functional Category: (26) Translation, post-translational modification, degradation
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: >gb|AAN68078.1| AE016439_13 (AE016783) translation initiation factor IF-3 [Pseudomonas putida
KT2440]
Length = 177
Score = 319 bits (818), Expect = 4e-87
Identities = 157/177 (88%), Positives = 170/177 (96%)
>gb|AAL87031.1| AF332624_2 (AF332624) initiation factor 3 [Azotobacter vinelandii]
Length = 181
Score = 319 bits (817), Expect = 5e-87
Identities = 157/177 (88%), Positives = 170/177 (96%)
>gb|AAO55890.1| (AE016864) translation initiation factor IF-3 [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 177
Score = 318 bits (816), Expect = 7e-87
Identities = 157/177 (88%), Positives = 170/177 (96%)
Structural Features: COG0290 , InfC, Translation initiation factor 3 (IF-3)
[Translation, ribosomal structure and biogenesis]
CD-Length = 176 residues, 95.5% aligned
Score = 224 bits (572), Expect = 3e-60
Identities = 111/168 (66%), Positives = 138/168 (82%)
pfam00707 , IF3_C, Translation initiation factor IF-3, C-terminal domain.
CD-Length = 88 residues, 100.0% aligned
Score = 106 bits (264), Expect = 2e-24
Identities = 50/88 (56%), Positives = 64/88 (72%)