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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06877.1|AE004770_2 (AE004770) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 194/194 (100%), Positives = 194/194 (100%)
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Sequence:
ATGACTGAACTCGCCCTGATCCTGGTCAGTGCCATCCTGGTCAACAACTTTGTCCTGGTGCAGTTCCTCGGC
CTGTGCCCGTTCATGGGCGTGTCGCGGAAGATCGAGACGGCCATCGGCCTGTCCCTCGCCACCACCTTCGTC
CTGACCCTGGCGGCGATGTGCAGCCATATCCTGCAACGCTACGTGCTGCGCCCGCTGGACCTGGAGTACCTG
CGCACCATCGGCTTCATCCTGGTGATCGCGGTGGTGGTGCAGTTCACCGAGATGCTGGTGAAGAAGACCAGC
CCGCTGCTGTACCGGGTGCTCGGCATCTTCCTGCCGCTGATCACCACCAATTGCATCGTCCTCGGCGTCGCC
CTGCTCAACGCCAACAAGGCTGAATACGGCTTCCTCCAGGCCACTACCCAGGGCTTCGGCGCCGGGCTGGGC
TTTTCCCTGGTGCTGGTGCTGTTCGCCGCCCTGCGCGAGCGCATCGCCATCGCCGACGTGCCGGCGCCGTTC
CGCGGCGCGGCCATCGGCATGATCACCGCCGGCCTGATGTCGCTGGCGTTCATGGGCTTCAGCGGGTTGGTC
CGGCCATGA |
Translation:
MTELALILVSAILVNNFVLVQFLGLCPFMGVSRKIETAIGLSLATTFVLTLAAMCSHILQRYVLRPLDLEYL
RTIGFILVIAVVVQFTEMLVKKTSPLLYRVLGIFLPLITTNCIVLGVALLNANKAEYGFLQATTQGFGAGLG
FSLVLVLFAALRERIAIADVPAPFRGAAIGMITAGLMSLAFMGFSGLVRP* |
AnnotationID:4045 | GeneID:4038 |
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Modification Date/Time: |
2005-04-19 12:12:23 |
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GeneProduct: | putative NADH:ubiquinone oxidoreductase, subunit RnfA |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (12) Energy metabolism |
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Alternate Gene Product Name: | putative electron transport complex protein rnfA |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAF94178.1| (AE004183) RnfA-related protein [Vibrio cholerae]
Length = 213
Score = 285 bits (728), Expect = 1e-76
Identities = 141/193 (73%), Positives = 172/193 (89%), Gaps = 1/193 (0%)
>gb|AAN80479.1|AE016761_54 (AE016761) Electron transport complex protein rnfA [Escherichia
coli CFT073]
Length = 193
Score = 274 bits (700), Expect = 2e-73
Identities = 137/193 (70%), Positives = 168/193 (87%), Gaps = 1/193 (0%)
>gb|AAP95363.1| (AE017152) probable Na+-translocating NADH-quinone oxidoreductase
[Haemophilus ducreyi 35000HP]
Length = 193
Score = 263 bits (671), Expect = 6e-70
Identities = 129/193 (66%), Positives = 166/193 (86%), Gaps = 1/193 (0%)
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Structural Features: | pfam02508, Rnf-Nqr, Rnf-Nqr subunit, membrane protein.
CD-Length = 192 residues, 99.5% aligned
Score = 185 bits (471), Expect = 3e-48
Identities = 109/192 (56%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
COG4657, RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
[Energy production and conversion]
CD-Length = 193 residues, 100.0% aligned
Score = 252 bits (646), Expect = 2e-68
Identities = 143/194 (73%), Positives = 171/194 (88%), Gaps = 1/194 (0%)
COG2209, NqrE, Na+-transporting NADH:ubiquinone oxidoreductase,
subunit NqrE
[Energy production and conversion]
CD-Length = 198 residues, 96.0% aligned
Score = 144 bits (364), Expect = 7e-36
Identities = 82/191 (42%), Positives = 117/191 (61%), Gaps = 7/191 (3%) |
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