ViewGene

Locus Name:
GeneID:
Location:

GeneID:4024
TrivialName: PA14_13260
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_13260
PAO1 Ortholog Locus:PA3915
Sequence Length:558
Protein Length:185
Start: 1140109
Stop: 1140666
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG07302.1|AE004809_2 (AE004809) molybdopterin biosynthetic protein B1 [Pseudomonas aeruginosa PAO1]
Identities = 184/185 (99%), Positives = 185/185 (100%)
Sequence:
ATGAGCCACCTGGCCACCTCCACCTTCCAGCCGCTGAACATCGCCATCCTCACCGTCAGCGACACCCGTACC
CTGGAAACCGATACTTCCGGCCAGACCCTCGCCGACGCGCTGCTGGCCGCCGGTCATCGCCTGCACCAGCGG
AGCCTGAAGTCCGATGACATCTACCAGATCCGCGCGGTGGTCTCGGCCTGGATCGCCGACCCCGAGGTACAG
GTCGGCCTGATCACCGGCGGCACCGGCTTCACCGCGCGGGATAACACCCCGCAGGCGGTCGGGCCGCTGTTC
GAGCGCGATGTGGAGGGCTTCGGCGAACTGTTCCGCCAGGTCTCGCAGCGCGAGATCGGCACTTCCACCATC
CAGTCGCGAGCGCTGGCCGGGCTCAGCAACGGTACCCTGGTGTGCTGCCTGCCCGGCTCGCCGGGCGCCTGT
CGCACCGCCTGGAACGAGATTCTCCTGGCGCAACTGGACAGCCGCACCCGCCCGTGCAATTTCGTCCCGCAC
CTGAAGACCCCGCCAGCCGTGGCGCCGGTGGCCGGCTGCGGGTGCCGCTCGTGA
Translation:
MSHLATSTFQPLNIAILTVSDTRTLETDTSGQTLADALLAAGHRLHQRSLKSDDIYQIRAVVSAWIADPEVQ
VGLITGGTGFTARDNTPQAVGPLFERDVEGFGELFRQVSQREIGTSTIQSRALAGLSNGTLVCCLPGSPGAC
RTAWNEILLAQLDSRTRPCNFVPHLKTPPAVAPVAGCGCRS*
AnnotationID:4031GeneID:4024
AnnotatorUID: urbach
Modification Date/Time: 2004-03-16 19:07:01
Gene Name:moaB1
Confidence Code:2
GeneProduct:MoaB1
Cell Localization:()
Synonyms:PA3915, molybdopterin biosynthetic protein B1
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(4) Biosynthesis of cofactors, prosthetic groups and carriers
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0521,pfam00994,COG0303,COG1058
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
53.51% Identity (D90716) MoaB protein. [Escherichia coli K12]
Structural Features:
Genomic Context:
Comment:
ReferenceID:8050
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:19768
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:4024_CDD.html
URL:
ReferenceID:25193
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:4024

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
6262 PA3915_tr translation of PA3915 185 99.45 99.99 0 956.0
172823 gb|AAG07302.1|AE004809_2 (AE004809) molybdopterin biosynthetic protein B1 [Pseudomonas aeruginosa PAO1] 185 99.45 99.99 0 956.0
6263 PA3029_tr translation of PA3029 187 66.84 74.86 10 623.0
172824 gb|AAG06417.1|AE004728_3 (AE004728) molybdopterin biosynthetic protein B2 [Pseudomonas aeruginosa PAO1] 187 66.84 74.86 10 623.0
172825 gb|AAO55863.1| (AE016864) molybdenum cofactor biosynthesis protein B [Pseudomonas syringae pv. tomato str. DC3000] 185 65.94 74.05 6 596.0
GC ORFID: 47026How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA3915Glimmer Score:
Start: 3813829Stop: 3813272
Length: 558
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA3915 translation of PA3915Homolog Bit Score 372.0
Other Homologs: t_PA3029 (ORF: BLASTX 244.0), psyr_15may02_Scaffold1_revised_gene1104 (ORF: BLASTX 231.0), t_PA3915 (ORF: GLIMMER)
GC ORF Sequence
ATGAGCCACCTGGCCACCTCCACCTTCCAGCCGCTGAACATCGCCATCCTCACCGTCAGCGACACCCGTACC
CTGGAAACCGATACTTCCGGCCAGACCCTCGCCGACGCGCTGCTGGCCGCCGGTCATCGCCTGCACCAGCGG
AGCCTGAAGTCCGATGACATCTACCAGATCCGCGCGGTGGTCTCGGCCTGGATCGCCGACCCCGAGGTACAG
GTCGGCCTGATCACCGGCGGCACCGGCTTCACCGCGCGGGATAACACCCCGCAGGCGGTCGGGCCGCTGTTC
GAGCGCGATGTGGAGGGCTTCGGCGAACTGTTCCGCCAGGTCTCGCAGCGCGAGATCGGCACTTCCACCATC
CAGTCGCGAGCGCTGGCCGGGCTCAGCAACGGTACCCTGGTGTGCTGCCTGCCCGGCTCGCCGGGCGCCTGT
CGCACCGCCTGGAACGAGATTCTCCTGGCGCAACTGGACAGCCGCACCCGCCCGTGCAATTTCGTCCCGCAC
CTGAAGACCCCGCCAGCCGTGGCGCCGGTGGCCGGCTGCGGGTGCCGCTCGTGA