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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07670.1|AE004844_2 (AE004844) probable exonuclease [Pseudomonas aeruginosa PAO1]
Identities = 1190/1211 (98%), Positives = 1197/1211 (98%)
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Sequence:
ATGAAGATTCTCGCCATCCGCCTGAAGAACCTCGCCTCCCTCGCTGGCGAGCAGGAAATCGACTTCACCCGC
GAACCGCTGTCCAGCGCCGGCCTGTTCGCCATCACCGGCCCGACCGGCGCCGGCAAGAGCACCGTGCTGGAC
GCCCTGTGCCTGGCCCTGTTCGGCAGCACGCCGCGGCTGGAAAGCACTTCGGCCAGCAGCAAGGTTCCCGAT
GGCCGGAACGAGCTGTCCAGCAACGACGAACGCAACCTGCTGCGCCGCGGTTGCGCCAACGGCTACGCCGAA
GTGGATTTCGTCGGCATCGACGGCCACCGCTATCGCGCCCGCTGGGAAACCCGGCGCTCCCGGGACAAGGCG
GACGGCGCCTTGCAAAAGAGCCAGCAGAGCCTCCAGGACCTGGAGACCCAGCAAATGCTGGCAGCGAACAAG
AAAAGCGAGTTCCGCGAACAGCTGGAGCAGAAGCTCGGCCTCAATTTCGCCCAGTTCACTCGCGCCGTGCTG
CTGGCCCAGAGCGAATTCAGCGCCTTCCTCAAGGCCAGCGACAACGACCGCGGCGCATTGCTGGAGAAACTC
ACCGACACCGGCCTGTACAGCCAATTGAGCAAAGCCGCCTACCAGCGCGCCAGCCAGGCCGACGAGCAGCGC
AAGCAACTCGAGCAACGCCTGGAAGGCAGCCTGCCCCTGGCCGAGCAGGCCCGGGCCGGGCTCGAGGCGGCG
CTGGAATCCCACGCCCAGGCGCGTCTCCAGGAGCAACAGGCCCTGCAGCGCCTGGAAGGCCAGCAACAATGG
TTCACCGAGGAGCAGCGGCTGCTGCAATCCTGCGAGCACGCACAAGGCCAACTGGCCGAGGCCAGGCAGGCC
TGGGACGCCCTGGCGACGGAGCGGGAAACCCTGCAATGGCTGGAGCGCCTGGCTCCGGTTCGCGGACTGATC
GAACGCCTGAAGCAACTCGAGCAGGAACTCCGGCACTCCGAGCAGCAGCAGCGGCAGCGCACCGAGCAGCAA
GCCGCGGGCGCCGAGCGCTTGCAAGGATTGCAGGCCCGCGTGCAGGAGGCGCGCGAGCGCCAGGCCCAGGCC
GACGACCATCTGCGTCAGGCCCAGGCGCCGTTGCGCGAGGCTTTCCAGCTGGAGAGCGAGGCCAGGCGCCTG
GAGCGAACGCTGGCCGAGCGACAGGCACTCCATCGGCAATCGAACCAGCGCCACGCCCAGCAAAGCGACGCC
GCTCGGCAACTGGATATGGAGCAGCAGCGCCATGTCGCGGAACAGGCGCAACTGCAGGCGGCATTGCGCGAC
AGCCAGGCTCTCGCCGCGCTCGGCGACGCCTGGGCGACCCACCAGGGCCAGCTCGCCGCCTTCGTGCAACGT
CGCCAGCGCGCGCTCGAAAGCCAGGCGCAGCTCCCCGAGCTGGAAAAATCCCTGGCCCAGGCCGGGGAACCG
CTCGAACGCTTGCAGGCGCAATGGACCGCCCTCCATGGCAGCGAGCCGGACGACCTGGCGGCACGCCTGGAC
GAATTGCGCCGGCAGACCGATAGCCTGGAACGACAACAAGCGCTCCACAAGGAATGGCAACAGGCCCTCGAC
CAACGCACCGGCCTGGCTCGACGCCTGGGCGAACTCGACCAGCGTATGGTCGAGCAGGAGCAGGCATTGCTC
GACCTGAAACGACAAGGCAGCCAATACGCCGAGGAGGTGAAGGCGGCGGAGCAGGCCCTGGAGGTCACCCGC
GAGTTGCTCCAACGCCAACGTCTGGCCCGCAGCGCCAGCGTCGAGCAACTGCGCGCCGGCCTGGTGGACGGC
GAGGCCTGCCCGGTCTGCGGCAGCCAGGAGCATCCCTATCACCATTCCGAGCAACTGCTCGCCGCCCTCGGT
GAACACGACGACCAGGAGCAGGTCCGCGCCGAGCAGTCCCTCGAGCGGCTGCGACAGACCCTGGTCGGTCTG
CGCGAGGGCTATTCCAGCCAGCGGGAAAGACTCAACCAGAGTCGCCAGGAGCAGCAGGAACTGACCGGCCAC
CTAGCCGCGCTCGATCGGCAACTGGAGCAATGGACGCTGCCGGAAGAACTGCGACTCCTGCAGCCGTCCGCG
CAGTTGGAGTGGCTGGCACAACGCCTGGACGACCTGGCAGGGCAGCGCCAGCAGCGCCAACGAGACTTCGAC
CGGCTGATCGCCCGCCAGCGCCAGACCCAGCAATTGCAGCAGGAACTGCGGGCCGCCGAGACGAGCCTGCAA
CAGCGCCAGCAGGCGCTGACGGAACAACGGCAGCGCTACGAACATTTGCAGCAGCAGGTCGAGGAGGACAGC
CAGCAATTGCGTCCATTGCTCTCCGACGAGCACTGGCAGCGCTGGCAGGCAGATCCGCTGCGGACTTTCCAG
GCCCTCGGCGAGTCCATCGAGCAACGCCGGCAGCAACAGGCGCGGCTTCAGCAGGTCGAACAGCGTCTGCAG
GAGCTCAAGCAGCGCTGCGATGAATCAAGCTGGCAACTGAAGCAAAGCGACGAGCAACGCAACGAAGCCCGC
CAGGCAGAGGAAAGGGTCCAGGCGGAACTCGCCGAGCTGAACGGACGCCTCGGCGCTCACCTGGGCCAGCAC
GCCTGCGCCCAGGACTGGCAACTATCGCTGGAGCACGCCGCGCAAGCGGCGCAGAGCGCTGTCGAGACGCTC
CAGGCGCCCCTGGATTCGCTGCGCGAGGAACAACTGCGACTCGCCGAAGCCCTGGAACACCTGCAGCAGCAA
CGGCAGCGCCAACAGGATGAGTTCCAGCGCCTGCAGGCCGACTGGCAGGCCTGGCGCGAACGCCAGGACAAC
CTCGACGACAGCCGCCTCGACGCCCTGCTCGGCCTTTCCGAGGAACAGGCGACGCAATGGCGGGAGCAATTG
CAGCGACTGCAAGAGGAGATCACCCGCCAGCAGACGCTGGAAGCGGAGCGCCAGGCGCAACTGCTCCAGCAT
CGCCGGCAGCGGCCGGAAACCGACCGCGAGGCGCTGGAAGACAACCTGCGGCAACAGCGCGAACGCCTGGCC
ACCAGCGAACAGGCCTACCTGGATACCTACAGCCAGTTGCAGGCCGACAACCAGCGCCGCGAGCAGAGCCAG
GCGCTGCTTGCCGAGCTGGAGCGAGCCCGCGCCGAGTTCCGTAGATGGGGCCGCCTGAACGAACTGATCGGT
TCGTCCAGCGGCGACAAGTTCCGCCGCATCGCCCAGGGCTACAACCTCGACCTGCTGGTGCAGCACAGCAAC
GTGCAGTTGCGCCAGTTGGCGCGGCGCTACCGCCTGCAGCGCGGCGGCAGCGAACTGGGCCTACTGGTGGTG
GACACCGAGATGGGCGACGAACTGCGCTCGGTGTATTCGCTCTCCGGCGGCGAGACCTTCCTGATTTCCCTG
GCCCTGGCGCTCGGCCTGGCCTCGATGGCATCGAGCAAGCTGCGCATCGAGTCGCTGTTCATCGACGAAGGC
TTCGGCAGCCTCGACCCGGAATCCCTGCAACTGGCGATGGATGCCCTGGACAACCTGCAGGCCCAGGGGCGC
AAGGTGGCGGTGATTTCCCACGTCCAGGAAATGCACGAACGGATCCCGGTCCAGGTGCGGGTCCAGCGCGAG
GGCAACGGCATGAGCAGCCTGAAGGTGGTCGGCTGA |
Translation:
MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPRLESTSASSKVPD
GRNELSSNDERNLLRRGCANGYAEVDFVGIDGHRYRARWETRRSRDKADGALQKSQQSLQDLETQQMLAANK
KSEFREQLEQKLGLNFAQFTRAVLLAQSEFSAFLKASDNDRGALLEKLTDTGLYSQLSKAAYQRASQADEQR
KQLEQRLEGSLPLAEQARAGLEAALESHAQARLQEQQALQRLEGQQQWFTEEQRLLQSCEHAQGQLAEARQA
WDALATERETLQWLERLAPVRGLIERLKQLEQELRHSEQQQRQRTEQQAAGAERLQGLQARVQEARERQAQA
DDHLRQAQAPLREAFQLESEARRLERTLAERQALHRQSNQRHAQQSDAARQLDMEQQRHVAEQAQLQAALRD
SQALAALGDAWATHQGQLAAFVQRRQRALESQAQLPELEKSLAQAGEPLERLQAQWTALHGSEPDDLAARLD
ELRRQTDSLERQQALHKEWQQALDQRTGLARRLGELDQRMVEQEQALLDLKRQGSQYAEEVKAAEQALEVTR
ELLQRQRLARSASVEQLRAGLVDGEACPVCGSQEHPYHHSEQLLAALGEHDDQEQVRAEQSLERLRQTLVGL
REGYSSQRERLNQSRQEQQELTGHLAALDRQLEQWTLPEELRLLQPSAQLEWLAQRLDDLAGQRQQRQRDFD
RLIARQRQTQQLQQELRAAETSLQQRQQALTEQRQRYEHLQQQVEEDSQQLRPLLSDEHWQRWQADPLRTFQ
ALGESIEQRRQQQARLQQVEQRLQELKQRCDESSWQLKQSDEQRNEARQAEERVQAELAELNGRLGAHLGQH
ACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQRLQADWQAWRERQDN
LDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLLQHRRQRPETDREALEDNLRQQRERLA
TSEQAYLDTYSQLQADNQRREQSQALLAELERARAEFRRWGRLNELIGSSSGDKFRRIAQGYNLDLLVQHSN
VQLRQLARRYRLQRGGSELGLLVVDTEMGDELRSVYSLSGGETFLISLALALGLASMASSKLRIESLFIDEG
FGSLDPESLQLAMDALDNLQAQGRKVAVISHVQEMHERIPVQVRVQREGNGMSSLKVVG* |
AnnotationID:50 | GeneID:40 |
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Modification Date/Time: |
2005-04-03 18:06:42 |
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GeneProduct: | putative exonuclease |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (11) DNA replication, recombination, modification and repair |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN67638.1|AE016393_7 (AE016781) exonuclease SbcC [Pseudomonas putida KT2440]
Length = 1214
Score = 946 bits (2446), Expect = 0.0
Identities = 572/1236 (46%), Positives = 777/1236 (62%), Gaps = 47/1236 (3%)
>gb|AAO57235.1| (AE016869) exonuclease SbcC [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 1214
Score = 882 bits (2279), Expect = 0.0
Identities = 531/1222 (43%), Positives = 736/1222 (60%), Gaps = 23/1222 (1%) |
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Structural Features: | COG0419, SbcC, ATPase involved in DNA repair
[DNA replication, recombination, and repair]
CD-Length = 908 residues, 84.6% aligned
Score = 145 bits (366), Expect = 3e-35
Identities = 176/785 (22%), Positives = 321/785 (40%), Gaps = 36/785 (4%)
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