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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG03529.1|AE004452_1 (AE004452) alkyl hydroperoxide reductase subunit C [Pseudomonas aeruginosa PAO1]
Identities = 187/187 (100%), Positives = 187/187 (100%)
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Sequence:
ATGTCCCTGATCAACACTCAAGTCCAACCGTTCAAGGTCAACGCTTTCCACAACGGCAAGTTCATCGAGGTG
ACCGAGGAATCCCTGAAGGGCAAGTGGTCGGTCCTGATCTTCATGCCGGCTGCCTTCACCTTCAACTGCCCG
ACCGAGATCGAAGACGCCGCCAACAACTACGGCGAGTTCCAGAAAGCCGGTGCCGAGGTCTACATCGTGACC
ACCGACACCCACTTCTCGCACAAGGTCTGGCACGAAACCTCCCCGGCCGTCGGCAAGGCCCAGTTCCCGCTG
ATCGGCGACCCGACCCACCAGCTGACCAACGCCTTCGGCGTGCACATCCCGGAAGAAGGCCTGGCCCTGCGC
GGTACCTTCGTGATCAACCCGGAAGGCGTGATCAAGACCGTCGAGATCCACTCCAACGAGATCGCCCGTGAC
GTCGGCGAGACCGTGCGCAAGCTGAAGGCCGCCCAGTACACCGCCGCCCACCCGGGCGAAGTCTGCCCGGCC
AAGTGGAAGGAAGGCGAGAAGACCCTCGCTCCGTCCCTGGACCTGGTCGGCAAGATCTAA |
Translation:
MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYGEFQKAGAEVYIVT
TDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARD
VGETVRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI* |
AnnotationID:3960 | GeneID:3953 |
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Modification Date/Time: |
2005-03-23 06:06:15 |
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GeneProduct: | alkyl hydroperoxide reductase subunit C |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (1) Adaptation, protection |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | posttranslational modification, protein turnover, chaperones |
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Homology: | >emb|CAD17396.1| (AL646077) PROBABLE ALKYL HYDROPEROXIDE REDUCTASE (SUBUNIT C)
OXIDOREDUCTASE PROTEIN [Ralstonia solanacearum]
Length = 187
Score = 346 bits (888), Expect = 4e-95
Identities = 163/187 (87%), Positives = 175/187 (93%)
>gb|AAM35795.1| (AE011722) alkyl hydroperoxide reductase subunit C [Xanthomonas
axonopodis pv. citri str. 306]
Length = 187
Score = 340 bits (873), Expect = 2e-93
Identities = 163/187 (87%), Positives = 173/187 (92%)
>gb|AAN68051.1|AE016437_8 (AE016783) alkyl hydroperoxide reductase, C subunit [Pseudomonas
putida KT2440]
Length = 187
Score = 265 bits (677), Expect = 1e-70
Identities = 122/187 (65%), Positives = 147/187 (78%)
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Structural Features: | COG0450, AhpC, Peroxiredoxin
[Posttranslational modification, protein turnover, chaperones]
CD-Length = 194 residues, 96.4% aligned
Score = 240 bits (614), Expect = 8e-65
Identities = 94/188 (50%), Positives = 118/188 (62%), Gaps = 5/188 (2%)
pfam00578, AhpC-TSA, AhpC/TSA family.
This family contains proteins related to alkyl hydroperoxide reductase (AhpC)
and thiol specific antioxidant (TSA).
CD-Length = 145 residues, 100.0% aligned
Score = 142 bits (359), Expect = 3e-35
Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
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