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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06860.1|AE004768_5 (AE004768) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 198/198 (100%), Positives = 198/198 (100%)
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Sequence:
ATGCGTTCACCCTTTTTGACATGCCTGTCTGTAGGCTTCGCGGCCCTTCTGGCCGCCCTCTCGACGCCCAGC
CTGGCTTCCAACCAGGTCACCCACACCTTCAAGCCGTCGAAGAATTCCACCCTGTCGCCCAGCCGGGTCGTC
AGCACCCGCCAGTCCGCCAACCGCTCGGTGGTCGCGGCCGCCGCTTCCGAAGTCACCGACCGCGCCTTCAGC
ATGATCGGCACCCCCTACCGCTGGGGCGGCACCACGCCGAAGAAAGGCTTCGATTGCAGCGGCCTGGTCAAC
TATGTGTTCCAGGACGTCGATGACGTCGACCTGCCGCGGACCGCCCGCGCCATCTACAACATGGACAACAAC
AAGGTCTCCCGCGGCAAGCTGCAACCGGGCGACCTGGTGTTCTTCCGGATCCGCAGCCGCAGCGTCGACCAC
GTCGGCATCTACGTCGGCAACGACCGCTTCGTGCACGCGCCGCGGCGCGGCAAGAAGGTCCGCGTCTCCGAC
CTCAACAGCAGCTACTGGAAACGCCACTACCTGGCCGGCAAGCGCATCCTGCCGACCACCCTCGCCCAGGTC
GAAAGCACCCGCAAGCGCTGA |
Translation:
MRSPFLTCLSVGFAALLAALSTPSLASNQVTHTFKPSKNSTLSPSRVVSTRQSANRSVVAAAASEVTDRAFS
MIGTPYRWGGTTPKKGFDCSGLVNYVFQDVDDVDLPRTARAIYNMDNNKVSRGKLQPGDLVFFRIRSRSVDH
VGIYVGNDRFVHAPRRGKKVRVSDLNSSYWKRHYLAGKRILPTTLAQVESTRKR* |
AnnotationID:3880 | GeneID:3873 |
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Modification Date/Time: |
2005-08-14 09:09:44 |
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GeneProduct: | putative lipoprotein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (7) Cell wall / LPS / capsule |
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Alternate Gene Product Name: | NLP/P60 family protein |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN70657.1|AE016710_2 (AE016793) NLP/P60 family protein [Pseudomonas putida KT2440]
Length = 207
Score = 174 bits (441), Expect = 3e-43
Identities = 80/153 (52%), Positives = 109/153 (71%), Gaps = 2/153 (1%)
>gb|AAP17151.1| (AE016984) putative lipoprotein [Shigella flexneri 2a str. 2457T]
Length = 275
Score = 138 bits (347), Expect = 2e-32
Identities = 61/143 (42%), Positives = 98/143 (68%), Gaps = 3/143 (2%)
>gb|AAO68950.1| (AE016838) putative secreted protein [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
Length = 284
Score = 137 bits (345), Expect = 4e-32
Identities = 60/139 (43%), Positives = 95/139 (68%), Gaps = 3/139 (2%) |
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Structural Features: | pfam00877, NLPC_P60, NlpC/P60 family.
CD-Length = 106 residues, 100.0% aligned
Score = 121 bits (306), Expect = 4e-29
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
COG0791, Spr, Cell wall-associated hydrolases
(invasion-associated proteins)
[Cell envelope biogenesis, outer membrane]
CD-Length = 197 residues, 97.0% aligned
Score = 137 bits (345), Expect = 9e-34
Identities = 71/191 (37%), Positives = 91/191 (47%), Gaps = 9/191 (4%) |
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