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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07960.1|AE004870_11 (AE004870) peptidyl-prolyl cis-trans isomerase FklB [Pseudomonas aeruginosa PAO1]
Identities = 205/205 (100%), Positives = 205/205 (100%)
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Sequence:
ATGAGCGAACTCAACCTGACCACTGACGAAGCCCGTGTCAGCTACGGCATCGGCCGTCAACTGGGCGACCAA
CTGCGCGAGAATCCGGTTCCAGGCATGACCCTGGACGCAGTCCTGGCCGGCCTGTCCGATGCGTTCGCAGGT
ATCGACAGCCGGGTTTCCGGCGAGGCGCTGTCGGCCAGCTTCCAGGTGATCCGCGAACGCATGCAGGCCGAA
GCCCAGGCCAAGGCCGAAGCCGCCGCTGGCGAAGGCCGCGCCTACCTGGCCGAGAACGCCAAGCGCGAAGGC
GTGACCGTGCTGCCGTCGGGCCTGCAATTCGAAGTGCTGAGTACTGGCGAGGGCGCCAAGCCTTCCCGCGAG
GATACCGTGCGCACCCACTACCACGGCACCCTGATCGACGGCACCGTATTCGACAGCTCCTACCAGCGCGGC
CAGCCGGCCGAGTTCCCGGTGGGCGGCGTGATCGCCGGCTGGGTCGAAGCGCTGCAACTGATGAACGCCGGC
TCCAAGTGGCGCCTGCACGTACCGAGCGAACTGGCCTATGGCGGCCAGGCGGTCGGCAGCATTCCCCCGCAC
AGCGTGCTGGTGTTCGACGTCGAACTGCTGGAAATCCTCTGA |
Translation:
MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAE
AQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRG
QPAEFPVGGVIAGWVEALQLMNAGSKWRLHVPSELAYGGQAVGSIPPHSVLVFDVELLEIL* |
AnnotationID:3842 | GeneID:3835 |
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Modification Date/Time: |
2005-05-05 08:08:03 |
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GeneProduct: | FKBP-type peptidyl-prolyl cis-trans isomerase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN66309.1|AE016259_7 (AE016776) peptidyl-prolyl cis-trans isomerase, FKBP-type
[Pseudomonas putida KT2440]
Length = 205
Score = 335 bits (860), Expect = 8e-92
Identities = 167/205 (81%), Positives = 184/205 (89%)
>gb|AAO58027.1| (AE016872) peptidyl-prolyl cis-trans isomerase, FKBP-type
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 224
Score = 328 bits (842), Expect = 9e-90
Identities = 163/205 (79%), Positives = 180/205 (87%)
>gb|AAN45697.1|AE015436_1 (AE015436) FKBP-type 22KD peptidyl-prolyl cis-trans isomerase
[Shigella flexneri 2a str. 301]
Length = 223
Score = 211 bits (536), Expect = 3e-54
Identities = 112/206 (54%), Positives = 139/206 (67%), Gaps = 1/206 (0%) |
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Structural Features: | COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1
[Posttranslational modification, protein turnover, chaperones]
CD-Length = 205 residues, 100.0% aligned
Score = 231 bits (589), Expect = 1e-61
Identities = 105/206 (50%), Positives = 137/206 (66%), Gaps = 2/206 (0%)
pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-trans isomerase.
CD-Length = 95 residues, 100.0% aligned
Score = 105 bits (263), Expect = 8e-24
Identities = 55/96 (57%), Positives = 64/96 (66%), Gaps = 6/96 (6%)
KOG0544, FKBP-type peptidyl-prolyl cis-trans isomerase
[Posttranslational modification, protein turnover, chaperones]
CD-Length = 108 residues, 98.1% aligned
Score = 98.4 bits (245), Expect = 1e-21
Identities = 48/106 (45%), Positives = 67/106 (63%), Gaps = 4/106 (3%) |
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