Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG07028.1| AE004784_1 (AE004784) DNA polymerase III, alpha chain [Pseudomonas aeruginosa PAO1]
Identities = 1173/1173 (100%), Positives = 1173/1173 (100%)
Sequence:
ATGACCGTATCCTTCGTTCACCTGCGTCTGCATACCGAATTCTCCCTGGTCGACGGCCTGGTCCGGGTCAAG
CCCCTGGCCAAGGCGGTGGCGGGGCTGGGCATGCCGGCGGTGGCGGTCACCGACCAGAGCAACATGTGCTCG
CTGGTGAAGTTCTACAAGACCGCCATGGGCGCCGGCATCAAGCCGATCTGCGGGGCCGACATCTGGCTCGCC
AGCCGCGAGGAAGATGGCCCGCTCAGCCGCCTGAGCCTGCTGGCGATGAACGCGAAGGGCTATCGCAACCTC
ACCGAGCTGATTTCCCGCGGCTGGAGCGAAGGCCAGCGCAATGGCGAGATCATCATCGAGCGCGACTGGGTC
AAGGAGGCGGCGGAAGGCCTGATCGCGCTGTCCGCGGCCAAGGAAGGCGAGATCGGCCACGCGCTGCTCGAC
GGCGAGGAGGCCAAGGCCGAGGCGCTGTTGCGCGAGTGGATGGAGGTGTTCCCCGAGCGCTTCTACGTCGAA
GTGCAACGTACCAGCCGGGTCAACGACGAGGAGCACCTCCACGCGGCGGTGGCTCTGGCGTCACGCTGTAAC
GCGCCGCTGGTGGCGACCAACGACGTGCGCTTCATCAAGCAGGAAGACTTCGAGGCCCACGAGACCCGCGTC
TGCATCGGCGAGGGGCGGACCCTCGACGATCCGCGGCGGCCGCGTACCTATTCGGACCAGCAATACCTGAAG
TCGCCGGCGGAAATGGCCGAGCTGTTCAGCGACCTGCCGGAAGCGTTGGAAAACACCGTCGAGATCGCCAAG
CGCTGCAACATCGAGGTGCAGCTGGGCAAGTACTTCCTGCCGGACTTCCCCACGCCCAATGGCATGGGCATC
GACGACTACCTGCGGCACGCCTCCTTCGAAGGTCTCGAGGAGCGCCTGGAGGTGCTGTTGCCGAAGGACACC
CCGGACTACGAGGCTAAGCGCCAGGTCTATGTCGACCGTCTGAACTTCGAACTCGATATCATCATCCAGATG
GGTTTCCCCGGTTACTTCCTCATCGTGATGGACTTCATCAAGTGGGCGAAGAACAACGGCGTGCCGGTAGGC
CCCGGGCGGGGCTCGGGCGCCGGCTCGCTGGTGGCCTACGTGCTGAAGATCACCGACCTCGATCCGCTGGCC
TACGACCTGCTGTTCGAACGTTTCCTCAACCCGGAACGGATCTCCATGCCCGACTTCGACGTCGACTTCTGC
ATGGAGGGCCGCGACCGGGTGATCGACTACGTGGCCGACGCCTACGGGCGCAACGCGGTGAGCCAGATCATC
ACCTTCGGCACGATGGCGGCGAAGGCGGTGGTACGCGACGTGGCGCGGGTCCAGGGCAAGTCCTACGGTCTC
GCCGACCGGCTGTCGAAGATGATTCCGTTCGAAGTCGGCATGACCCTGGATAAGGCCTACGAGCAGGAAGAA
ATGCTCCGCGACTTCCTCAAGAGCGACGAGGAAGCCGCCGAGATCTGGGAGATGGCCCTCAAGCTGGAAGGC
ATCACCCGCGGTACCGGCAAGCACGCTGGTGGCGTGGTGATCGCGCCGACCAAGCTGACCGACTTCTCGCCG
ATCGCCTGCGACGAGGAAGGCGGCGGCCTGGTGACCCAGTTCGACAAGGACGACGTGGAGGCGGCCGGCCTG
GTGAAGTTCGACTTCCTCGGCCTGCGGACCCTGACCATCATCAAGTGGGCGATGGAGATCATCAACCGCGAG
CAGGCCAAGAAGGGCCTGGAGCCGGTGAACATCGACTTCATCCCGCTGGACGACAAGCCGACCTATTCGCTG
CTGCAGAAGGCCGAGACCACTGCGGTGTTCCAGCTCGAATCGCGCGGCATGAAGGAGCTGATCAAGAAGCTC
AAGCCGGACTGCCTGGAAGACCTCATCGCACTGGTGGCGCTGTTCCGCCCGGGTCCTCTGCAGTCGGGCATG
GTGGACGACTTCATCAACCGCAAGCACGGTCGCGCCGAGCTGTCCTATCCGCACCCCGATTACCAGTACGCC
GGCCTGGAGCCGGTGCTCAAACCCACCTACGGCATCATCCTGTACCAGGAACAGGTGATGCAGATCGCCCAG
GTCATGGCCGGCTATACCCTCGGTGGCGCGGACATGCTGCGCCGGGCGATGGGCAAGAAGAAGCCCGAGGAA
ATGGCCAAGCAGCGCGGCGGTTTCATCGAGGGTTGCAAGAACAACGGCATCGATGCCGATCTCGCGGGCAAC
ATCTTCGACCTGGTGGAAAAATTCGCCGGCTACGGCTTCAACAAGTCACACTCGGCAGCCTACGGCCTGGTC
TCCTACCAGACCGCTTGGCTGAAGACCCACTTCCCGGCGCCGTTCATGGCCGCGGTACTCACCGCGGATATG
CAGAACACCGACAAGGTGGTGACGCTGATCGAAGAATGCCGGCACATGAAGCTGCGCATCGTGGCGCCGGAC
GTGAACAACTCCGAGTTCCGCTTCACCGTCGACGACGATGGCCGGATCGTCTATGGCCTGGGTGCGATCAAG
GGCGTCGGCGAGGGGCCGGTGGAGGCGATCACCGAATGCCGCGCCGAAGGCGGGCCGTTCAACACCCTGTTC
GATTTCTGCGACCGCGTCGACCTCAAGCGCATCAACAAGCGCACCCTGGAAGCGCTGATCCGCGCCGGTGCG
CTGGATCGCCTGGGGCCGCACTACCACGATGAGCTAAAGGCCTACCAGGCTACCGTCGACCTCAACCGCGCC
GTGCTGCTGGCGGCGATGGAGGAAGCGATCCAGGCCGCGGAGCAGACCGCGCGCAGTCACGACAGCGGGCAC
ATGGACCTGTTCGGCGGAGTCTTCGCCGAGCCGGAGGCGGATGTCTACGCCAACCACCGCAAGGTCAAGGAG
CTGACCCTCAAGGAACGCCTGAAGGGCGAGAAGGACACCCTCGGCCTGTACCTGACCGGCCATCCGATCGAC
GAGTACGAAGGCGAGGTGCGGCGCTTCGCCCGCCAGCGCATCGTCGAGCTGAAGCCGGCGCGCGATACCCAG
ACGGTGGCCGGGCTGATCGTCAACCTGCGGGTGATGAAGAACAAGAAGGGCGACAAGATGGGCTTCGTCACC
CTCGACGACCGCTCCGGACGGATCGAGGCCTCGCTGTTCTCCGAAGCCTTCGCCGCGGCCCAGTCGCTGCTG
CAGACCGACGCGCTGGTGGTGGTCGAGGGCGAGGTCAGCCAGGACGACTTCTCCGGCGGACTGCGCCTGCGC
GCCAAGCGCGTGATGAGCCTGGAGGAAGCGCGTACCGGCCTGGCGGAGAGCCTGCGGATGAAGCTGCACGCC
GACCTGTTGAAGGGCGACCGCCTGCGCTGGCTGGGCGAGCTGTTCAACCGCCATCGCGGTTCCTGCCCGATC
ACCCTGGACTACACCAGCGCCGACGCCAAGGCCCTGCTGCAGTTCGGCGAGAGCTGGCGGGTGGATCCGGCG
GACGATCTGATCCAGGCATTGCGTGACCAGTTCGGGCGCGACAACGTCTTCCTCAATTATCGTTAA
Translation:
MTVSFVHLRLHTEFSLVDGLVRVKPLAKAVAGLGMPAVAVTDQSNMCSLVKFYKTAMGAGIKPICGADIWLA
SREEDGPLSRLSLLAMNAKGYRNLTELISRGWSEGQRNGEIIIERDWVKEAAEGLIALSAAKEGEIGHALLD
GEEAKAEALLREWMEVFPERFYVEVQRTSRVNDEEHLHAAVALASRCNAPLVATNDVRFIKQEDFEAHETRV
CIGEGRTLDDPRRPRTYSDQQYLKSPAEMAELFSDLPEALENTVEIAKRCNIEVQLGKYFLPDFPTPNGMGI
DDYLRHASFEGLEERLEVLLPKDTPDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMEGRDRVIDYVADAYGRNAVSQII
TFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLDKAYEQEEMLRDFLKSDEEAAEIWEMALKLEG
ITRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLVTQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINRE
QAKKGLEPVNIDFIPLDDKPTYSLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGM
VDDFINRKHGRAELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQRGGFIEGCKNNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHFPAPFMAAVLTADM
QNTDKVVTLIEECRHMKLRIVAPDVNNSEFRFTVDDDGRIVYGLGAIKGVGEGPVEAITECRAEGGPFNTLF
DFCDRVDLKRINKRTLEALIRAGALDRLGPHYHDELKAYQATVDLNRAVLLAAMEEAIQAAEQTARSHDSGH
MDLFGGVFAEPEADVYANHRKVKELTLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQ
TVAGLIVNLRVMKNKKGDKMGFVTLDDRSGRIEASLFSEAFAAAQSLLQTDALVVVEGEVSQDDFSGGLRLR
AKRVMSLEEARTGLAESLRMKLHADLLKGDRLRWLGELFNRHRGSCPITLDYTSADAKALLQFGESWRVDPA
DDLIQALRDQFGRDNVFLNYR*
AnnotationID:48 GeneID:38
Modification Date/Time:
2005-04-20 21:09:48
GeneProduct: DNA polymerase III, alpha subunit
Cell Localization Confidence Code: 5
Functional Category: (11) DNA replication, recombination, modification and repair
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: >gb|AAN67227.1| AE016349_8 (AE016779) DNA polymerase III, alpha subunit [Pseudomonas putida
KT2440]
Length = 1174
Score = 2008 bits (5201), Expect = 0.0
Identities = 985/1174 (83%), Positives = 1085/1174 (92%), Gaps = 1/1174 (0%)
>gb|AAG54486.1| AE005194_7 (AE005194) DNA polymerase III, alpha subunit [Escherichia coli
O157:H7 EDL933]
Length = 1160
Score = 1336 bits (3457), Expect = 0.0
Identities = 688/1174 (58%), Positives = 863/1174 (73%), Gaps = 26/1174 (2%)
Structural Features: COG0587 , DnaE, DNA polymerase III, alpha subunit
[DNA replication, recombination, and repair]
CD-Length = 1139 residues, 100.0% aligned
Score = 1366 bits (3536), Expect = 0.0
Identities = 590/1177 (50%), Positives = 774/1177 (65%), Gaps = 45/1177 (3%)