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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08634.1|AE004937_6 (AE004937) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 209/209 (100%), Positives = 209/209 (100%)
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Sequence:
ATGCTCGTCAGTACCTGGTTCGCCTTCTTTCTCGCCTGCTGGGCCATCAGCCTGTCGCCGGGCGCCGGAGCC
ATCGCCTCGATGTCCTGCGGGTTGCAGTACGGCTTTGCGCGAGGCTACTGGAACGCGCTGGGCCTGCAGATC
GGCCTGGCCCTGCAGATCGCCATCGTCGCCGCCGGCGTCGGTGCGTTGCTGGCGACCTCGGCACTGGCTTTC
AGCCTGATCAAGTGGTTCGGCGTGGCCTACCTGGTGTACCTGGCGGTGCGCCAGTGGCAGGCGCCGCCACAG
GCCTTGAGCACCGATGGCGAACGGCCTCTGGGGCGACCGTTGACCCTGGTGCTGCGTGGTTTCCTGGTCAAC
GCCAGCAATCCCAAGGCGGTGATCTTCATGCTCGCGGTGCTGCCGCAGTTCATCGACCCGCACCAGCCGCTG
CTGGCGCAGTACCTGATCATGGGCGGCACCATGATCGTCGTCGACCTGATCGTCATGGCCGGCTACACCGGA
CTGGCTGCGCGCGTGCTACGGGTACTGCGTTCGCCGCGCCAGCAGAAGCTGGTGAACCGTACCTTCGCCAGC
CTGTTCGTCGGCGCCGCGGGGCTGCTGGCGACGGTACGCCGAGCGCCGCTCTGA |
Translation:
MLVSTWFAFFLACWAISLSPGAGAIASMSCGLQYGFARGYWNALGLQIGLALQIAIVAAGVGALLATSALAF
SLIKWFGVAYLVYLAVRQWQAPPQALSTDGERPLGRPLTLVLRGFLVNASNPKAVIFMLAVLPQFIDPHQPL
LAQYLIMGGTMIVVDLIVMAGYTGLAARVLRVLRSPRQQKLVNRTFASLFVGAAGLLATVRRAPL* |
AnnotationID:3792 | GeneID:3785 |
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Modification Date/Time: |
2005-03-16 07:07:26 |
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GeneProduct: | putative LysE family efflux protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | amino acid transport and metabolism |
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Homology: | >gb|AAO53694.1| (AE016856) homoserine/homoserine lactone efflux protein
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 210
Score = 305 bits (780), Expect = 2e-82
Identities = 148/207 (71%), Positives = 175/207 (84%), Gaps = 1/207 (0%)
>gb|AAN65831.1|AE016211_9 (AE016774) transporter, LysE family [Pseudomonas putida KT2440]
Length = 210
Score = 302 bits (774), Expect = 8e-82
Identities = 147/210 (70%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
>emb|CAE39608.1| (BX640436) LysE family efflux protein [Bordetella parapertussis]
Length = 209
Score = 221 bits (562), Expect = 3e-57
Identities = 112/207 (54%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
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Structural Features: | COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]
CD-Length = 208 residues, 100.0% aligned
Score = 120 bits (303), Expect = 1e-28
Identities = 80/208 (38%), Positives = 116/208 (55%), Gaps = 2/208 (0%)
pfam01810, LysE, LysE type translocator.
CD-Length = 191 residues, 98.4% aligned
Score = 94.5 bits (235), Expect = 7e-21
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 1/189 (0%) |
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