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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04587.1|AE004550_3 (AE004550) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 205/205 (100%), Positives = 205/205 (100%)
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Sequence:
GTGCCCATGCTTAAACGCTTAGCACCCCTCGTGCCCATGAGTTTCGTTCTGCTGCTGGCCGCTTGCGCCAGC
CATTCGCCGGAGCCGCAGGTCGCCAAAGAGCCGACCGCAGCCAAGAGCAGCATCGACGTCGAACGCGACGCG
ATCGCTTGGCAGGATGTTGAGGACGAAGGGGCGGACAATTCATCGGCTGGTACGCCTGCGCTGGCGTCCAGC
ATCCTCGAGCGCGCTTTCGAACTGATCGGTACGCCGTACCGTTTCGGCGGTACGACGGCGAAAGGCTTCGAT
TGCAGCGGCTTCGTCGGCTACCTGTTCCGCGAGGAGGCCGGCATCAAGCTGCCGCGCTCCACCCGCGAACTC
ATCGATATGGACGTGCCGCTGGTCTCCAAGGACGAGTTGCAGCCGGGCGACCTGCTGTTCTTCAACAACCGT
GGCCGTGGCCGCGTCAGCCACGCCGGCATCTACATCGGCGATGGCCAGTTCATCCATTCCGCCAGCCGTCGC
GGCGGCGGGGTGCGGGTGGACAGCCTGGACTCCAGCTACTGGAGCCTGAGCTACATGGAAGCCAAGCGGGTG
CTCGAACCCGGCTACAAGGACGCCCTGACGAGCAAGCGCTAA |
Translation:
MPMLKRLAPLVPMSFVLLLAACASHSPEPQVAKEPTAAKSSIDVERDAIAWQDVEDEGADNSSAGTPALASS
ILERAFELIGTPYRFGGTTAKGFDCSGFVGYLFREEAGIKLPRSTRELIDMDVPLVSKDELQPGDLLFFNNR
GRGRVSHAGIYIGDGQFIHSASRRGGGVRVDSLDSSYWSLSYMEAKRVLEPGYKDALTSKR* |
AnnotationID:3786 | GeneID:3779 |
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Modification Date/Time: |
2005-05-08 18:06:46 |
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GeneProduct: | putative lipoprotein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (13) Fatty acid and phospholipid metabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | cell envelope biogenesis |
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Homology: | >gb|AAN67290.1|AE016355_8 (AE016780) NLP/P60 family protein [Pseudomonas putida KT2440]
Length = 214
Score = 220 bits (561), Expect = 4e-57
Identities = 115/204 (56%), Positives = 142/204 (69%), Gaps = 11/204 (5%)
>gb|AAO55225.1| (AE016861) NLP/P60 family protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 242
Score = 202 bits (515), Expect = 8e-52
Identities = 112/209 (53%), Positives = 145/209 (69%), Gaps = 17/209 (8%)
>gb|AAM37599.1| (AE011915) lipoprotein [Xanthomonas axonopodis pv. citri str. 306]
Length = 217
Score = 134 bits (336), Expect = 4e-31
Identities = 76/179 (42%), Positives = 104/179 (58%), Gaps = 22/179 (12%)
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Structural Features: | COG0791, Spr, Cell wall-associated hydrolases
(invasion-associated proteins)
[Cell envelope biogenesis, outer membrane]
CD-Length = 197 residues, 88.8% aligned
Length = 197, Score = 122 bits (306), Expect = 7e-29
Identities = 68/176 (38%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
pfam00877, NLPC_P60, NlpC/P60 family.
CD-Length = 106 residues, 100.0% aligned
Length = 106, Score = 118 bits (296), Expect = 1e-27
Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 6/111 (5%) |
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