ViewGene

Locus Name:
GeneID:
Location:

GeneID:3765
TrivialName: PA14_43150
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_43150
PAO1 Ortholog Locus:PA1652
Sequence Length:636
Protein Length:211
Start: 3844087
Stop: 3843452
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05041.1|AE004593_3 (AE004593) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 207/210 (98%), Positives = 208/210 (99%)
Sequence:
ATGGATGCAAACCCCTACGCCACGCCGCGTGTCGAATTGGTCGAGCAGGGCATACCGGATGCTTTCCGCCGG
CGCTGGACGCCCGCGCAACTGCGCATCCTCGCCTGGCTCTGCCTGGCCTCGATAGCCGGCGGCGTGGTGCTG
ATGGTGCTCAGCCTGCTGGAGGCATTCGGCGATGGCGCCGCGTTCGGGGTCTACGCCGACTGGCTGGGCCTG
CTCCTCAGCCTGCTCGGCGCCTACCTGCTGCTGCGGCTCAAGCACCTGGTCGAGTCGCGCTTTCGCGGCCCC
TCGCTGGCCTGGCCGGTATGGTTGTCGATTCTCCTGACCCTGCTGGGCGAGGGCTGGAGCCTGCTGGCGGTT
ACCGACGATGCGCTGCAGGGTTGGAACTGGCAGGCGCTGGTGTACTTCGCGCTGCTTGCGCTGATCGGCGCT
ACCACCCTCTGGCTGGGCCTGCGTCTGCTCAAGCAGGAAAACCTCTATCCGTCGCTGCGGATCATGGCCTGG
CTGGACATCGCCGGCGGCGCGATGCTGGCTTCGGTGCTGTTGCTGGTGCTGGCGGTACTGCCGCTGCTGGCC
GCCACCCTGGCCATGGCGCTGGCCTGCTGGCGCGCGGCGCGGGAGCTGGAGCGGGGCTAG
Translation:
MDANPYATPRVELVEQGIPDAFRRRWTPAQLRILAWLCLASIAGGVVLMVLSLLEAFGDGAAFGVYADWLGL
LLSLLGAYLLLRLKHLVESRFRGPSLAWPVWLSILLTLLGEGWSLLAVTDDALQGWNWQALVYFALLALIGA
TTLWLGLRLLKQENLYPSLRIMAWLDIAGGAMLASVLLLVLAVLPLLAATLAMALACWRAARELERG*
AnnotationID:3772GeneID:3765
AnnotatorUID: diggins
Modification Date/Time: 2005-02-27 17:05:21
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA1652
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:7533
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:24675
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:3765

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
5981 PA1652_tr translation of PA1652 211 98.10 98.57 0 1057.0
167366 gb|AAG05041.1|AE004593_3 (AE004593) hypothetical protein PA1652 [Pseudomonas aeruginosa PAO1] 211 98.10 98.57 0 1057.0
GC ORFID: 46767How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA1652Glimmer Score:
Start: 1109822Stop: 1110457
Length: 636
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: t_PA1652 translation of PA1652Homolog Bit Score 411.0
Other Homologs: t_PA1652 (ORF: GLIMMER)
GC ORF Sequence
ATGGATGCAAACCCCTACGCCACGCCGCGTGTCGAATTGGTCGAGCAGGGCATACCGGATGCTTTCCGCCGG
CGCTGGACGCCCGCGCAACTGCGCATCCTCGCCTGGCTCTGCCTGGCCTCGATAGCCGGCGGCGTGGTGCTG
ATGGTGCTCAGCCTGCTGGAGGCATTCGGCGATGGCGCCGCGTTCGGGGTCTACGCCGACTGGCTGGGCCTG
CTCCTCAGCCTGCTCGGCGCCTACCTGCTGCTGCGGCTCAAGCACCTGGTCGAGTCGCGCTTTCGCGGCCCC
TCGCTGGCCTGGCCGGTATGGTTGTCGATTCTCCTGACCCTGCTGGGCGAGGGCTGGAGCCTGCTGGCGGTT
ACCGACGATGCGCTGCAGGGTTGGAACTGGCAGGCGCTGGTGTACTTCGCGCTGCTTGCGCTGATCGGCGCT
ACCACCCTCTGGCTGGGCCTGCGTCTGCTCAAGCAGGAAAACCTCTATCCGTCGCTGCGGATCATGGCCTGG
CTGGACATCGCCGGCGGCGCGATGCTGGCTTCGGTGCTGTTGCTGGTGCTGGCGGTACTGCCGCTGCTGGCC
GCCACCCTGGCCATGGCGCTGGCCTGCTGGCGCGCGGCGCGGGAGCTGGAGCGGGGCTAG