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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06620.1|AE004746_4 (AE004746) probable nuclease [Pseudomonas aeruginosa PAO1]
Identities = 205/208 (98%), Positives = 207/208 (99%)
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Sequence:
ATGAACACCATGGTCAAGTTGCCCGACAGCCGCTGGCCGGGCTGGCGCCGCCGGCTGTATTGGTGGATGCAC
GAGGCGGTCGAGGCGGAGGAAGTGATCTCCCTCGATCTCGAGACCACCAGCCTCGACCCGCGTCGTGCCGAC
GTCCTCAGCATCGGCGCGGTGCTGGTGCGGCGCGGCAAACTGGTCATGGGCGAGCGCCTGGAACTCTACGTC
GAGCCGCCGCCGAGCCTGGACGCGGAGTCGATCCGCATCCACAAGCTGCGCCGCGCCGACCTGGAGGGACAG
TTGCAGCTGGAGCAGGCCCTGCGCCAGTTGCTGGCGTTCATCGGCGACCGGCCGCTGCTCGGCTACTACCTG
TCGTTCGATGTCGCCGTGCTGAACCGGCACCTGCGCCAGCTCTTCGACCGACAGTTGCACAACCCTTCCATC
GAGATTTCGTCGCTGTACCACCGGAAGGTCAGCCGGCATTTTCCCGACGCACACATCGACCTGCGCTTCGAC
ACCCTGGCGCGGGCCCTGGATGTGCCGGTCAGCGGTCGCCATACCGCCCTCGGCGACGCCCAGGCGGTGGCG
CTGATGTTCATGCGCCTGCTCAAGGGGCCGGCGCCCAAGGTCATCCACTGA |
Translation:
MNTMVKLPDSRWPGWRRRLYWWMHEAVEAEEVISLDLETTSLDPRRADVLSIGAVLVRRGKLVMGERLELYV
EPPPSLDAESIRIHKLRRADLEGQLQLEQALRQLLAFIGDRPLLGYYLSFDVAVLNRHLRQLFDRQLHNPSI
EISSLYHRKVSRHFPDAHIDLRFDTLARALDVPVSGRHTALGDAQAVALMFMRLLKGPAPKVIH* |
AnnotationID:3754 | GeneID:3747 |
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Modification Date/Time: |
2005-04-14 13:01:21 |
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GeneProduct: | putative nuclease |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (11) DNA replication, recombination, modification and repair |
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Alternate Gene Product Name: | putative DNA polymerase III, epsilon subunit |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAF93473.1| (AE004118) DNA polymerase III, epsilon subunit, putative [Vibrio
cholerae]
Length = 223
Score = 157 bits (397), Expect = 4e-38
Identities = 82/208 (39%), Positives = 125/208 (60%), Gaps = 11/208 (5%)
>gb|AAO09695.1|AE016801_14 (AE016801) DNA polymerase III, epsilon subunit [Vibrio vulnificus
CMCP6]
Length = 211
Score = 155 bits (393), Expect = 1e-37
Identities = 78/202 (38%), Positives = 124/202 (61%), Gaps = 10/202 (4%) |
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Structural Features: | smart00479, EXOIII, exonuclease domain in DNA-polymerase alpha
and epsilon chain, ribonuclease T and other exonucleases
CD-Length = 171 residues, 97.7% aligned
Score = 87.7 bits (217), Expect = 9e-19
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
pfam00929, Exonuc_X-T, Exonuclease
CD-Length = 162 residues, 100.0% aligned
Score = 70.8 bits (173), Expect = 1e-13
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