ViewGene

Locus Name:
GeneID:
Location:

GeneID:3734
TrivialName: PA14_55300
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_55300
PAO1 Ortholog Locus:PA0697
Sequence Length:663
Protein Length:220
Start: 4910241
Stop: 4909579
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04086.1|AE004505_7 (AE004505) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 219/220 (99%), Positives = 220/220 (100%)
Sequence:
ATGAACACGCGACCTTTCTCATTACCGATCTGGGCCCAGGCGCTGCTTGCCGGGGCCGCCTTCGCCGCCTAC
GCCAGCCAGGCGGCCTACGCCGACAGCCTGGAGGAACGCCTGCGCGCCCAGTTGCGCAGCACCACCCAGCAA
CTCCAGGCGCTGCAGACCGAACAGGCCCAGGCCACCGCGGCGAAAGCCGCGCTGGAAAGCCAGCGCGATGCG
GCGCTGGCCCAGGTCAAGCAACTGACCGCCGAGCTGGCCCGGGCCAAGGGCCAGGCCGAGCAGCTCTCGGCC
CAGCAACAGGGCTTGCACGACCGGGCGCGGCAGATGGTCGAGGCGAGCAACGAGCAACTGGGCAAGTACAAG
CAGGCCTACGACGAGTTGCTGGTCATGGCGCGAGCCAAGGAGGCCGAGCGGCAGAAGCTCGACCTGGCGTTC
CGCGAGCACGACCAGCAGTTGCAGCAGTGCACCGCGAAGAACCGGGAAATGTATGGCGTGGCCAAGGAGATC
CTCGGCGCCTACGAGAACGTCAGCGTCGCCGAGGTGATGAAGATCCGCCAACCGTTCGCCAGCGGTGCGCGG
GTGAAATTCGAAGAGATGGCGCAGAAGCTCGGCGACGATCTCTACAAGACTCAGGTCGAGAACCGCCAGGCG
GCGCTCGCCCAGTGA
Translation:
MNTRPFSLPIWAQALLAGAAFAAYASQAAYADSLEERLRAQLRSTTQQLQALQTEQAQATAAKAALESQRDA
ALAQVKQLTAELARAKGQAEQLSAQQQGLHDRARQMVEASNEQLGKYKQAYDELLVMARAKEAERQKLDLAF
REHDQQLQQCTAKNREMYGVAKEILGAYENVSVAEVMKIRQPFASGARVKFEEMAQKLGDDLYKTQVENRQA
ALAQ*
AnnotationID:3741GeneID:3734
AnnotatorUID: danlee
Modification Date/Time: 2004-03-11 17:05:25
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA0697
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:7471
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:24613
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:3734

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
5947 PA0697_tr translation of PA0697 220 99.54 99.99 0 1069.0
166223 gb|AAG04086.1|AE004505_7 (AE004505) hypothetical protein PA0697 [Pseudomonas aeruginosa PAO1] 220 99.54 99.99 0 1069.0
GC ORFID: 46736How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0697Glimmer Score:
Start: 43666Stop: 44328
Length: 663
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA0697 translation of PA0697Homolog Bit Score 416.0
Other Homologs: t_PA0697 (ORF: GLIMMER)
GC ORF Sequence
ATGAACACGCGACCTTTCTCATTACCGATCTGGGCCCAGGCGCTGCTTGCCGGGGCCGCCTTCGCCGCCTAC
GCCAGCCAGGCGGCCTACGCCGACAGCCTGGAGGAACGCCTGCGCGCCCAGTTGCGCAGCACCACCCAGCAA
CTCCAGGCGCTGCAGACCGAACAGGCCCAGGCCACCGCGGCGAAAGCCGCGCTGGAAAGCCAGCGCGATGCG
GCGCTGGCCCAGGTCAAGCAACTGACCGCCGAGCTGGCCCGGGCCAAGGGCCAGGCCGAGCAGCTCTCGGCC
CAGCAACAGGGCTTGCACGACCGGGCGCGGCAGATGGTCGAGGCGAGCAACGAGCAACTGGGCAAGTACAAG
CAGGCCTACGACGAGTTGCTGGTCATGGCGCGAGCCAAGGAGGCCGAGCGGCAGAAGCTCGACCTGGCGTTC
CGCGAGCACGACCAGCAGTTGCAGCAGTGCACCGCGAAGAACCGGGAAATGTATGGCGTGGCCAAGGAGATC
CTCGGCGCCTACGAGAACGTCAGCGTCGCCGAGGTGATGAAGATCCGCCAACCGTTCGCCAGCGGTGCGCGG
GTGAAATTCGAAGAGATGGCGCAGAAGCTCGGCGACGATCTCTACAAGACTCAGGTCGAGAACCGCCAGGCG
GCGCTCGCCCAGTGA