ViewGene
Locus Name:
GeneID:
Location:

GeneID:3714
TrivialName: PA14_63470
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_63470
PAO1 Ortholog Locus:PA4803
Sequence Length:618
Protein Length:205
Start: 5659247
Stop: 5658630
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG08189.1|AE004893_7 (AE004893) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 205/205 (100%), Positives = 205/205 (100%)
Sequence:
ATGTCCGAACGAGAGCACTGGCAACGGGTATACGAGAGCAAGCCGTCCGACGCGGTGAGCTGGTTCCAGGCC
GAGGCCACGCTGTCCCTCGACCTGATCCGACGCATCGGCGCGCCCCGCGAGGCGGCGATCATCGACGTCGGC
GGCGGCGCCTCGACCCTGGTCGACGGCCTGCTCGCCGAAGGCTTCGGCGACCTGACGGTGCTCGACCTTTCC
GACGCCGCCCTGCGCGTCGCCCGCAACCGCCTCGGCGCGCGCGGCGAAGAGGTGCGCTGGATCGCCGGCGAC
ATCACCGGCGTCGACCTGCCGGAAGCCACCTACGATGTCTGGCACGACCGCGCCGTGTTCCACTTCCTTACC
ACTGCCGAAGCCCGCCGCGCCTATGTGCGCCAGGTGATGAAGGCGGTCCGCCACGGCGGCCACGTGATCGTC
GCCACCTTCGCCGCCGACGGTCCGACCGAATGCAGCGGCCTGCCGGTCATGCGCTACGACGCCGACGAACTG
CACGCCGAGTTCGGCTCCGCCTTCCAGCTCACCGAGCACCGCGACGAACACCACGTCACTCCCGCCGGCCGG
GTCCAGCACTTCGTCTACTGCCATTGCCTGAAACGCCTGTGA
Translation:
MSEREHWQRVYESKPSDAVSWFQAEATLSLDLIRRIGAPREAAIIDVGGGASTLVDGLLAEGFGDLTVLDLS
DAALRVARNRLGARGEEVRWIAGDITGVDLPEATYDVWHDRAVFHFLTTAEARRAYVRQVMKAVRHGGHVIV
ATFAADGPTECSGLPVMRYDADELHAEFGSAFQLTEHRDEHHVTPAGRVQHFVYCHCLKRL*
AnnotationID:3722GeneID:3714
AnnotatorUID: ericdeziel
Modification Date/Time: 2004-03-08 15:03:43
Gene Name:PA4803
Confidence Code:3
GeneProduct:Putative methyltransferase
Cell Localization:()
Synonyms:PA4803
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
KOG1271, Methyltransferases [General function prediction only]






   
Genomic Context:






   
Comment:


















    ReferenceID:7431




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:24573




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:3714
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
5924
                           PA4803_tr
                           translation of PA4803
                           205
                           99.99
                           99.99
                           0
                           1078.0
     

     
     
165810
                           gb|AAG08189.1|AE004893_7
                           (AE004893) hypothetical protein PA4803 [Pseudomonas aeruginosa PAO1]
                           205
                           99.99
                           99.99
                           0
                           1078.0
     

     
     
165811
                           dbj|BAC45493.1|
                           (AP005935) blr0228 [Bradyrhizobium japonicum USDA 110]
                           255
                           40.00
                           48.23
                           51
                           487.0
     

     






      

          
GC ORFID: 46716How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA4803Glimmer Score: 

          
Start: 4922927Stop: 4922310

          
Length: 618


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA4803 translation of PA4803Homolog Bit Score 419.0

          
Other Homologs:  t_PA4803 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGTCCGAACGAGAGCACTGGCAACGGGTATACGAGAGCAAGCCGTCCGACGCGGTGAGCTGGTTCCAGGCC 
GAGGCCACGCTGTCCCTCGACCTGATCCGACGCATCGGCGCGCCCCGCGAGGCGGCGATCATCGACGTCGGC 
GGCGGCGCCTCGACCCTGGTCGACGGCCTGCTCGCCGAAGGCTTCGGCGACCTGACGGTGCTCGACCTTTCC 
GACGCCGCCCTGCGCGTCGCCCGCAACCGCCTCGGCGCGCGCGGCGAAGAGGTGCGCTGGATCGCCGGCGAC 
ATCACCGGCGTCGACCTGCCGGAAGCCACCTACGATGTCTGGCACGACCGCGCCGTGTTCCACTTCCTTACC 
ACTGCCGAAGCCCGCCGCGCCTATGTGCGCCAGGTGATGAAGGCGGTCCGCCACGGCGGCCACGTGATCGTC 
GCCACCTTCGCCGCCGACGGTCCGACCGAATGCAGCGGCCTGCCGGTCATGCGCTACGACGCCGACGAACTG 
CACGCCGAGTTCGGCTCCGCCTTCCAGCTCACCGAGCACCGCGACGAACACCACGTCACTCCCGCCGGCCGG 
GTCCAGCACTTCGTCTACTGCCATTGCCTGAAACGCCTGTGA