Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG08055.1| AE004880_11 (AE004880) probable lipoprotein localization protein LolB [Pseudomonas aeruginosa PAO1]
Identities = 205/205 (100%), Positives = 205/205 (100%)
Sequence:
ATGCGTCTACGTCTTTTCCTCGCCGCCTCCGCGCTGGCCCTGCTCAGCGGCTGCGCCGGCCTGACCTCCCAC
GAAGCCCTGGAAGGCCAGGGCGATGCGCAGACCTGGAAAACCCACAAGCAGCAACTCAGCGAGCTGGATGCC
TGGCAGATCGACGGCAAGGTCGGCATCCGCGCCCCGCGCGACTCCGGCAGCGGCACCCTGTTCTGGCTGCAG
CGCCAGGGCTACTACGACATCCGCCTGTCCGGCCCGCTCGGCCGCGGCGCAGCACGCCTGACCGGGCGTGAA
GGCGCGGTGAGCCTGGAAGTCGCCGGGCAGGGCCGCTACCAGGCGGAGTCCCCGGAAGCCCTGCTGGAAGAA
CAACTAGGCTGGCGCCTGCCGGTCTCGCACCTGCTCTGGTGGGTACGCGGCCTCCCGGCGCCGGACAGCAAG
AGCCGCCTGACCCTCGACGCCGACAGTCGCCTGGCGCGCTTGGAACAGGACGGCTGGCAGATCGAATACACC
CGCTACGCCGAACAGAACGGCTACTGGCTACCCGAGCGCCTGAAGCTGCACGGCCAGGACCTCGACGTCACC
CTGGTGATCAAGGACTGGCAGCCGCGCCAGCTCGGCCGCTGA
Translation:
MRLRLFLAASALALLSGCAGLTSHEALEGQGDAQTWKTHKQQLSELDAWQIDGKVGIRAPRDSGSGTLFWLQ
RQGYYDIRLSGPLGRGAARLTGREGAVSLEVAGQGRYQAESPEALLEEQLGWRLPVSHLLWWVRGLPAPDSK
SRLTLDADSRLARLEQDGWQIEYTRYAEQNGYWLPERLKLHGQDLDVTLVIKDWQPRQLGR*
AnnotationID:3706 GeneID:3698
Modification Date/Time:
2005-05-20 12:12:00
GeneProduct: putative lipoprotein localization protein LolB
Cell Localization: (6) Outer membrane protein
Cell Localization Confidence Code: 2
Functional Category: (7) Cell wall / LPS / capsule
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: >gb|AAO54635.1| (AE016859) outer membrane lipoprotein LolB [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 205
Score = 343 bits (881), Expect = 3e-94
Identities = 160/205 (78%), Positives = 181/205 (88%)
>gb|AAN66349.1| AE016263_6 (AE016776) outer membrane lipoprotein LolB [Pseudomonas putida
KT2440]
Length = 205
Score = 341 bits (875), Expect = 1e-93
Identities = 160/204 (78%), Positives = 177/204 (86%)
Structural Features: pfam03550 , LolB, Outer membrane lipoprotein LolB.
CD-Length = 189 residues, 100.0% aligned
Score = 193 bits (491), Expect = 1e-50
Identities = 69/189 (36%), Positives = 88/189 (46%), Gaps = 3/189 (1%)