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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07651.1|AE004841_29 (AE004841) 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1]
Identities = 211/211 (100%), Positives = 211/211 (100%)
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Sequence:
ATGACAATTGGTGTTGTCGGTCGTAAATGCGGCATGACCCGCATTTTCACCGAGGAAGGTGTCTCTATTCCG
GTTACGGTCATCGAGGTCGAGCCGAATCGCGTCACCCAGTTCAAGACTGAAGAAACCGATGGCTACCGTGCA
GTGCAAGTCACCGCCGGCGAGCGTCGTGCTTCTCGCGTTACCAAAGCGCAAGCTGGTCACTTTGCCAAGGCG
AATGTCGCCGCCGGTCGCGGCGTGTGGGAATTCCGTCTGGGCGAAGAGCAGTATGCCGCTGGTGACCAGATC
ACTGTCGATCTGTTCCAGGCAGGCCAGATGGTAGACGTTACCGGCGAGTCCAAGGGTAAGGGCTTCGCGGGC
ACCATCAAGCGCTGGAACTTCCGTGGTCAGGATAACACCCACGGTAACTCCGTTTCCCACCGCGTCCCGGGT
TCCATCGGCCAGTGCCAGACTCCTGGTCGAGTGTTCAAGGGCAAGAAAATGTCCGGTCATCTGGGTGCGGAG
CGGGTAACCGTTCAATCCCTGGAGATCGTGCGCGTCGATGCTGAACGCAATCTGCTGCTGGTCAAGGGTGCC
GTTCCCGGCGCTACCGGCGGTGATGTGATCGTGCGTCCGGCAGCCAAGGCTCGCGGTTAA |
Translation:
MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASRVTKAQAGHFAKA
NVAAGRGVWEFRLGEEQYAAGDQITVDLFQAGQMVDVTGESKGKGFAGTIKRWNFRGQDNTHGNSVSHRVPG
SIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLVKGAVPGATGGDVIVRPAAKARG* |
AnnotationID:3704 | GeneID:3696 |
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Modification Date/Time: |
2005-04-03 16:04:22 |
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GeneProduct: | 50S ribosomal protein L3 |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | translation, ribosomal structure and biogenesis |
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Homology: | >gb|AAN66084.1|AE016238_2 (AE016775) ribosomal protein L3 [Pseudomonas putida KT2440]
Length = 222
Score = 389 bits (1000), Expect = e-108
Identities = 190/211 (90%), Positives = 200/211 (94%)
>gb|AAO54168.1| (AE016858) ribosomal protein L3 [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 211
Score = 384 bits (985), Expect = e-106
Identities = 189/211 (89%), Positives = 200/211 (94%)
>gb|AAO09270.1|AE016799_168 (AE016799) Ribosomal protein L3 [Vibrio vulnificus CMCP6]
Length = 209
Score = 325 bits (834), Expect = 8e-89
Identities = 158/208 (75%), Positives = 182/208 (87%), Gaps = 1/208 (0%) |
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Structural Features: | pfam00297, Ribosomal_L3, Ribosomal protein L3.
CD-Length = 200 residues, 100.0% aligned
Score = 203 bits (519), Expect = 1e-53
Identities = 97/201 (48%), Positives = 121/201 (60%), Gaps = 7/201 (3%) |
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