ViewGene

Locus Name:
GeneID:
Location:

GeneID:3692
TrivialName: PA14_28110
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_28110
PAO1 Ortholog Locus:PA2782
Sequence Length:660
Protein Length:219
Start: 2435260
Stop: 2434601
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06170.1|AE004705_12 (AE004705) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 211/219 (96%), Positives = 211/219 (96%)
Sequence:
GTGGCCAAGACATGGATCTACGCAGCCTCGGCCGCCGCCATCGGCGGTGCGCTGATCGGCGGCTGGCTGCTC
GACCCGGCTCCGCCCGAGGCACCGCCGCAGGCCCGCCAGTCCCCCGCCGCCCAGGCAGTCGCCGCCCCGGCA
GCGGCGCTCGCGGCGCCGACGGCGGACGCTACCCACATGCTCGCCCCGGCCCCCGTCGCAGCGCCCGCGCCA
CGTGAGCGGGTGACACTCTGGCAAGGCGAACTGCGCAGCCGCGAAGGCGCCCAGGGCATTCCCGAATACCTG
GCGCAGGTCGAACCCGCCCTGCTCGACACGCTGGCGCTCGGCCAGGTGCTGGAAATGAGCCTGCCGGGTCGC
GAGCGGCCCTTGCAGGCACGCCTCGCCAGCACCCATAACAGCGCCGGCCTGCCGGTCTGGCGCGGCGGCCTG
GTGGACGGCGACGAGGCGGAAAGCCTGACCGTGGTGCGCGGCAGCCTGGAAACCCACATCAATGTCGCCACC
CTCGACGGCAGCTACTCGATCATCGTCGACAACCGCAGCGGCAAGACCCGGGTGATCGACGAGAACGACATC
GCCGCGCGTAGCGACCCGCATGGCGATCATGTCGACGCGCCGCTCGCCGAGCTGCCACCGATGCCGCCGCCC
GCCCAGGGCTGA
Translation:
MAKTWIYAASAAAIGGALIGGWLLDPAPPEAPPQARQSPAAQAVAAPAAALAAPTADATHMLAPAPVAAPAP
RERVTLWQGELRSREGAQGIPEYLAQVEPALLDTLALGQVLEMSLPGRERPLQARLASTHNSAGLPVWRGGL
VDGDEAESLTVVRGSLETHINVATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPP
AQG*
AnnotationID:3700GeneID:3692
AnnotatorUID: diggins
Modification Date/Time: 2005-04-06 02:02:16
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA2782
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:14897
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:24529
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:36261
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:3692_cdd.html
URL:
Homologs By Global Alignment
Gene ID:3692

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
5895 PA2782_tr translation of PA2782 219 96.34 96.34 0 1082.0
165218 gb|AAG06170.1|AE004705_12 (AE004705) hypothetical protein PA2782 [Pseudomonas aeruginosa PAO1] 219 95.89 96.34 0 1079.0
GC ORFID: 46694How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA2782Glimmer Score:
Start: 2518666Stop: 2519325
Length: 660
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA2782 translation of PA2782Homolog Bit Score 421.0
Other Homologs: t_PA2782 (ORF: GLIMMER)
GC ORF Sequence
GTGGCCAAGACATGGATCTACGCAGCCTCGGCCGCCGCCATCGGCGGTGCGCTGATCGGCGGCTGGCTGCTC
GACCCGGCTCCGCCCGAGGCACCGCCGCAGGCCCGCCAGTCCCCCGCCGCCCAGGCAGTCGCCGCCCCGGCA
GCGGCGCTCGCGGCGCCGACGGCGGACGCTACCCACATGCTCGCCCCGGCCCCCGTCGCAGCGCCCGCGCCA
CGTGAGCGGGTGACACTCTGGCAAGGCGAACTGCGCAGCCGCGAAGGCGCCCAGGGCATTCCCGAATACCTG
GCGCAGGTCGAACCCGCCCTGCTCGACACGCTGGCGCTCGGCCAGGTGCTGGAAATGAGCCTGCCGGGTCGC
GAGCGGCCCTTGCAGGCACGCCTCGCCAGCACCCATAACAGCGCCGGCCTGCCGGTCTGGCGCGGCGGCCTG
GTGGACGGCGACGAGGCGGAAAGCCTGACCGTGGTGCGCGGCAGCCTGGAAACCCACATCAATGTCGCCACC
CTCGACGGCAGCTACTCGATCATCGTCGACAACCGCAGCGGCAAGACCCGGGTGATCGACGAGAACGACATC
GCCGCGCGTAGCGACCCGCATGGCGATCATGTCGACGCGCCGCTCGCCGAGCTGCCACCGATGCCGCCGCCC
GCCCAGGGCTGA